RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TMEM236Q5W0B7 351 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 Q6ZPB1 254 aaPredicted RBP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 AHSA2Q719I0 299 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 TCEAL8Q8IYN2 117 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 SLC39A11Q8N1S5 342 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 SETD9Q8NE22 299 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 FIBINQ8TAL6 211 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 NDNFQ8TB73 568 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 SPPL2AQ8TCT8 520 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 FKBP10Q96AY3 582 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 CNDP2Q96KP4 475 aaKnown RBP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF641Q96N77 438 aaPredicted RBP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 IL1RAPQ9NPH3 570 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 PRDM8Q9NQV8 689 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 VPS29Q9UBQ0 182 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 SLC25A13Q9UJS0 675 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF510Q9Y2H8 683 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 TPRKBQ9Y3C4 175 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 KCNE1BA0A087WTH5 132 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 CBFA2T3O75081 653 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 KCNK5O95279 499 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 MT-ND2P03891 347 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 ETV3P41162 512 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 CYP2A13Q16696 494 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 PAGE2BQ5JRK9 111 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 GPR153Q6NV75 609 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 FAM9CQ8IZT9 166 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 C1orf52Q8N6N3 182 aaKnown RBP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF366Q8N895 744 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 FAR1Q8WVX9 515 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 RAPGEFL1Q9UHV5 662 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 DAPK2Q9UIK4 370 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 ENPP5Q9UJA9 477 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 CCL26Q9Y258 94 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 THSD7BQ9C0I4 1608 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 LEFTY2O00292 366 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 YY2O15391 372 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 UGT2B11O75310 529 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 CD22P20273 847 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 IDUAP35475 653 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 DOC2AQ14183 400 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 LAIR1Q6GTX8 287 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 ADCK1Q86TW2 530 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 OR52J3Q8NH60 311 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 CSGALNACT1Q8TDX6 532 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 TESCQ96BS2 214 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 TRIT1Q9H3H1 467 aaKnown RBP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 FAM83DQ9H4H8 585 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 TPT1P8Q9HAU6 139 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 TRNAU1APQ9NX07 287 aaKnown RBP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 MYO1DO94832 1006 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF12P17014 697 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 BDKRB1P46663 353 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 NCS1P62166 190 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 CYP27C1Q4G0S4 372 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 THOC6Q86W42 341 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 ZZZ3Q8IYH5 903 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 CHPFQ8IZ52 775 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 TCAIMQ8N3R3 496 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 DNAJB8Q8NHS0 232 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 APOL4Q9BPW4 351 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 RPS6KA6Q9UK32 745 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 SAP18O00422 153 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 SLC16A6O15403 523 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 POP4O95707 220 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 CXCL10P02778 98 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 SLC6A12P48065 614 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 HNMTP50135 292 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 PFN3P60673 137 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 MAPK11Q15759 364 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 SLC39A5Q6ZMH5 540 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 HSD11B1LQ7Z5J1 315 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 PLPP6Q8IY26 295 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 TRUB1Q8WWH5 349 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 RIOK2Q9BVS4 552 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 TM9SF3Q9HD45 589 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 FZD4Q9ULV1 537 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 TESMINQ9Y4I5 508 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 PLXNA4Q9HCM2 1894 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 MGAT4DA6NG13 374 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 NUAK1O60285 661 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 ANXA4P09525 319 aaPredicted RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 CCDC159P0C7I6 412 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 JUPP14923 745 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 ITIH1P19827 911 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 PPM1AP35813 382 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 TGFBR1P36897 503 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 NNMTP40261 264 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 ASTLQ6HA08 431 aaPredicted RBP13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 GALNT13Q8IUC8 556 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 L3MBTL4Q8NA19 623 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 ASZ1Q8WWH4 475 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 RPL3LQ92901 407 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms