RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CNTN2Q02246 1040 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 ZNF792Q3KQV3 632 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 NCEH1Q6PIU2 408 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 CHST9Q7L1S5 443 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 SERPINA9Q86WD7 417 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 NMUR1Q9HB89 426 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 PCDH7O60245 1069 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 ACTC1P68032 377 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 ACTA1P68133 377 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 GPR33Q49SQ1 333 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 PLD5Q8N7P1 536 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 SCN8AQ9UQD0 1980 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 RAD51DO75771 328 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 ST3GAL3Q11203 375 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 POU4F2Q12837 409 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 HERVK_113Q902F9 699 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 TVP23BQ9NYZ1 205 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 POMPQ9Y244 141 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 IFNGR1P15260 489 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 DHCR24Q15392 516 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 MFSD2AQ8NA29 543 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 POTEKPQ9BYX7 375 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 IRF2BPLQ9H1B7 796 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 VPS29Q9UBQ0 182 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 TLR6Q9Y2C9 796 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 PCDHGA2Q9Y5H1 932 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 K7EPI3 171 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 CXCL14O95715 111 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 MLLT3P42568 568 aaPredicted RBP15.1■□□□□ 0.01
HCFC1-201ENST00000310441 DAG1Q14118 895 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 SLC36A4Q6YBV0 504 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 TIGARQ9NQ88 270 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 PADI2Q9Y2J8 665 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 PLD2O14939 933 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 SLC16A8O95907 504 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 MT-ND2P03891 347 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 SOX9P48436 509 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 MARCKSL1P49006 195 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 DRICH1Q6PGQ1 229 aaPredicted RBP15.1■□□□□ 0.01
HCFC1-201ENST00000310441 SH3RF1Q7Z6J0 888 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 LSM14AQ8ND56 463 aaKnown RBP15.1■□□□□ 0.01
HCFC1-201ENST00000310441 STON2Q8WXE9 905 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 TMEM80Q96HE8 168 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 MEPEQ9NQ76 525 aaPredicted RBP15.1■□□□□ 0.01
HCFC1-201ENST00000310441 NOTOA8MTQ0 251 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 TPST2O60704 377 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 PPM1BO75688 479 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 BCKDHAP12694 445 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 MATN1P21941 496 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 OR1D2P34982 312 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 DPP6P42658 865 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 ACTA2P62736 377 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 ACTG2P63267 376 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 MEDAGQ5VYS4 303 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 FAM46DQ8NEK8 389 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 WFIKKN2Q8TEU8 576 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 UCKL1Q9NWZ5 548 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 CENPBD1B2RD01 187 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 GMFGO60234 142 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 PGDP52209 483 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 DSTNP60981 165 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 BRAT1Q6PJG6 821 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 CFAP52Q8N1V2 620 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 LNX1Q8TBB1 728 aaPredicted RBP15.1■□□□□ 0.01
HCFC1-201ENST00000310441 C19orf12Q9NSK7 152 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 ALKBH4Q9NXW9 302 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 SLC27A5Q9Y2P5 690 aa15.1■□□□□ 0.01
HCFC1-201ENST00000310441 LOC100130705A0A1B0GUX0 176 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 CLCN2P51788 898 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 ZNF781Q8N8C0 355 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 TNFRSF25Q93038 417 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 TMEM125Q96AQ2 219 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 LRRC58Q96CX6 371 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 CSNK2A2P19784 350 aaPredicted RBP15.09■□□□□ 0.01
HCFC1-201ENST00000310441 KIAA0930Q6ICG6 404 aaPredicted RBP15.09■□□□□ 0.01
HCFC1-201ENST00000310441 SLC24A5Q71RS6 500 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 TREML1Q86YW5 311 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 PMM1Q92871 262 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 WRAP53Q9BUR4 548 aaKnown RBP15.09■□□□□ 0.01
HCFC1-201ENST00000310441 SLC29A3Q9BZD2 475 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 ZBTB46Q86UZ6 589 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 WDR55Q9H6Y2 383 aaPredicted RBP15.09■□□□□ 0.01
HCFC1-201ENST00000310441 GNG8Q9UK08 70 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 FFAR2O15552 330 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 GRID2O43424 1007 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 GOT2P00505 430 aaKnown RBP15.09■□□□□ 0.01
HCFC1-201ENST00000310441 IFNA5P01569 189 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 RORAP35398 523 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 IRF2BP2Q7Z5L9 587 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 SLC15A3Q8IY34 581 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 IQCKQ8N0W5 287 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 ARL14Q8N4G2 192 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 FBXO15Q8NCQ5 510 aaPredicted RBP15.09■□□□□ 0.01
HCFC1-201ENST00000310441 P2RX7Q99572 595 aaKnown RBP15.09■□□□□ 0.01
HCFC1-201ENST00000310441 C13orf42A0A1B0GVH6 325 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 POU2F1P14859 743 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 GSTM2P28161 218 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 KLHDC10Q6PID8 442 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 ACBD6Q9BR61 282 aa15.09■□□□□ 0.01
HCFC1-201ENST00000310441 COQ10BQ9H8M1 238 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms