RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 IDSP22304 550 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 PEX2P28328 305 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 AQP1P29972 269 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 AVPR2P30518 371 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 NSG1P42857 185 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SERPINB8P50452 374 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LIMK2P53671 638 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 GFERP55789 205 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 HPCAP84074 193 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 CLCA4Q14CN2 919 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LRRC36Q1X8D7 754 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 PGS1Q32NB8 556 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 MMEL1Q495T6 779 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 RALGPS1Q5JS13 557 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 CTSL3PQ5NE16 218 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LYSMD4Q5XG99 296 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 HMBOX1Q6NT76 420 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 RAB44Q7Z6P3 723 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 TMEM151BQ8IW70 566 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 CENPLQ8N0S6 344 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 AARSD1Q9BTE6 412 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 KIFC1Q9BW19 673 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SRMSQ9H3Y6 488 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 RETREG1Q9H6L5 497 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 C8orf33Q9H7E9 229 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 INTS7Q9NVH2 962 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 DHCR7Q9UBM7 475 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 NAV2Q8IVL1 2488 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LOC730098B7Z3J9 87 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SLC22A2O15244 555 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SEC22BO75396 215 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 CPSF4O95639 269 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 CAPN1P07384 714 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 ENO3P13929 434 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 VCLP18206 1134 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 HNRNPA2B1P22626 353 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 NFKBIAP25963 317 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 ITGB7P26010 798 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 PPP1R8Q12972 351 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 CHIT1Q13231 466 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LRRC32Q14392 662 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 AASDHQ4L235 1098 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 LRRC8EQ6NSJ5 796 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 Q6ZNX1 250 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 OLIG3Q7RTU3 272 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LRRTM4Q86VH4 590 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SFRP1Q8N474 314 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 OR56A4Q8NGH8 313 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 OR5M3Q8NGP4 307 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 GABPB2Q8TAK5 448 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 DTD2Q96FN9 168 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 FRMD6Q96NE9 622 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 TRIB3Q96RU7 358 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 TBCDQ9BTW9 1192 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 ELOVL6Q9H5J4 265 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 MAGEE1Q9HCI5 957 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 EIF2B3Q9NR50 452 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 OLAHQ9NV23 265 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 PPT2Q9UMR5 302 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 CHD6Q8TD26 2715 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 C2orf16Q68DN1 1984 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SMIM31A0A1B0GVY4 71 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 C7orf72A4D263 438 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 FKBP6O75344 327 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 CYP7B1O75881 506 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LTA4HP09960 611 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 ACRV1P26436 265 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SLC1A6P48664 564 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 ZNF140P52738 457 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 SRP54P61011 504 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 ZXDAP98168 799 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LRRC74AQ0VAA2 488 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 RALGDSQ12967 914 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SQSTM1Q13501 440 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 PUS10Q3MIT2 529 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 ZC3H14Q6PJT7 736 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 CRLF3Q8IUI8 442 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 ZNF547Q8IVP9 402 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SCUBE1Q8IWY4 988 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SELENOMQ8WWX9 145 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LPGAT1Q92604 370 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 LRRC39Q96DD0 335 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 PLEKHG4BQ96PX9 1271 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 INSM2Q96T92 566 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 TSC22D3Q99576 134 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 MESP1Q9BRJ9 268 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 SRA1Q9HD15 236 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 TM9SF3Q9HD45 589 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 NLE1Q9NVX2 485 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 ZDHHC3Q9NYG2 299 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 TMEM9Q9P0T7 183 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 OPTCQ9UBM4 332 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 USP9YO00507 2555 aaPredicted RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 ZNF407Q9C0G0 2248 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 PCM1Q15154 2024 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 RALGAPA1Q6GYQ0 2036 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 IGHV1OR15-9A0A0B4J2B8 117 aa4.77□□□□□ -1.65
CAST-201ENST00000309190 SOBPA7XYQ1 873 aa4.77□□□□□ -1.65
CAST-201ENST00000309190 ARNTLO00327 626 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms