RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MAPK1P28482 360 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 CSTF1Q05048 431 aaKnown RBP16.88■□□□□ 0.29
KRT28-201ENST00000306658 CUL3Q13618 768 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 PLCL1Q15111 1095 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 TEAD4Q15561 434 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 DNAL1Q4LDG9 190 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 TMIGD1Q6UXZ0 262 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 GK5Q6ZS86 529 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 SLC9B2Q86UD5 537 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 SDR16C5Q8N3Y7 309 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 SLC22A18Q96BI1 424 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 EFCAB1Q9HAE3 211 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 MAGEB17A8MXT2 336 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 SLC22A3O75751 556 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 G6PDP11413 515 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 PIK3CBP42338 1070 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 NME5P56597 212 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 KCNJ2P63252 427 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 UBE2IP63279 158 aaKnown RBP16.88■□□□□ 0.29
KRT28-201ENST00000306658 KIAA0040Q15053 153 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 LYSMD4Q5XG99 296 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 CYP20A1Q6UW02 462 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 RBM12BQ8IXT5 1001 aaKnown RBP16.88■□□□□ 0.29
KRT28-201ENST00000306658 FAM9CQ8IZT9 166 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 NAGSQ8N159 534 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 OR4K1Q8NGD4 311 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 OR9I1Q8NGQ6 314 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 ZDHHC1Q8WTX9 485 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 MCUR1Q96AQ8 359 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 CAAP1Q9H8G2 361 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 MRPS30Q9NP92 439 aaKnown RBP16.88■□□□□ 0.29
KRT28-201ENST00000306658 ADGRE2Q9UHX3 823 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 DOLKQ9UPQ8 538 aa16.88■□□□□ 0.29
KRT28-201ENST00000306658 POLR3HQ9Y535 204 aaPredicted RBP16.88■□□□□ 0.29
KRT28-201ENST00000306658 H7BY64 318 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 AIM2O14862 343 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 GSC2O15499 205 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 PRICKLE3O43900 615 aaPredicted RBP16.87■□□□□ 0.29
KRT28-201ENST00000306658 KRT16P08779 473 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 CHRM5P08912 532 aaPredicted RBP16.87■□□□□ 0.29
KRT28-201ENST00000306658 ACPPP15309 386 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 GNSP15586 552 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 CD1EP15812 388 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 HRH2P25021 359 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 DHPSP49366 369 aaPredicted RBP16.87■□□□□ 0.29
KRT28-201ENST00000306658 MEF2AQ02078 507 aaPredicted RBP16.87■□□□□ 0.29
KRT28-201ENST00000306658 GPR18Q14330 331 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 SF1Q15637 639 aaKnown RBP16.87■□□□□ 0.29
KRT28-201ENST00000306658 MMEL1Q495T6 779 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 FUNDC1Q8IVP5 155 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 ARHGAP24Q8N264 748 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 AVL9Q8NBF6 648 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 LMX1AQ8TE12 382 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 SLC37A2Q8TED4 501 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 TSPEARQ8WU66 669 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 GAB3Q8WWW8 586 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 PATE1Q8WXA2 126 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 PRAP1Q96NZ9 151 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 MRPL1Q9BYD6 325 aaKnown RBP16.87■□□□□ 0.29
KRT28-201ENST00000306658 NT5DC2Q9H857 520 aa16.87■□□□□ 0.29
KRT28-201ENST00000306658 CUEDC1Q9NWM3 386 aaPredicted RBP16.87■□□□□ 0.29
KRT28-201ENST00000306658 ZDBF2Q9HCK1 2354 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 SDK1Q7Z5N4 2213 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 ISM1B1AKI9 464 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 PRPS2P11908 318 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 AMD1P17707 334 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 CMPK1P30085 196 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 SERPINB1P30740 379 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 YBX1P67809 324 aaKnown RBP16.86■□□□□ 0.29
KRT28-201ENST00000306658 KIR2DS3Q14952 304 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 RBBP5Q15291 538 aaKnown RBP16.86■□□□□ 0.29
KRT28-201ENST00000306658 BLOC1S3Q6QNY0 202 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 RNF175Q8N4F7 328 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 KYQ8NBH2 561 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 FBXO27Q8NI29 283 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 JPH3Q8WXH2 748 aaPredicted RBP16.86■□□□□ 0.29
KRT28-201ENST00000306658 CADM1Q9BY67 442 aaKnown RBP16.86■□□□□ 0.29
KRT28-201ENST00000306658 MMADHCQ9H3L0 296 aaPredicted RBP16.86■□□□□ 0.29
KRT28-201ENST00000306658 TMEM184CQ9NVA4 438 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 NDE1Q9NXR1 346 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 VCANP13611 3396 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 BDP1A6H8Y1 2624 aa16.86■□□□□ 0.29
KRT28-201ENST00000306658 FAM221BA6H8Z2 402 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 ANKDD1BA6NHY2 528 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 BBIP1A8MTZ0 92 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 MYO1DO94832 1006 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 GRK3P35626 688 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 CPOXP36551 454 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 NUDT2P50583 147 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 KCNK10P57789 538 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 UFM1P61960 85 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 RPS13P62277 151 aaKnown RBP16.85■□□□□ 0.29
KRT28-201ENST00000306658 SLC25A3Q00325 362 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 REEP5Q00765 189 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 HHEXQ03014 270 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 ACSM2AQ08AH3 577 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 ART3Q13508 389 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 ACSM2BQ68CK6 577 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 PMS2CLQ68D20 193 aa16.85■□□□□ 0.29
KRT28-201ENST00000306658 ADCK2Q7Z695 626 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms