RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 COX7A2P14406 83 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 CYP2A7P20853 494 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 AQP1P29972 269 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 WEE1P30291 646 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 OPRL1P41146 370 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 EIF2B2P49770 351 aaKnown RBP12.49□□□□□ -0.41
HIF3A-204ENST00000300862 VLDLRP98155 873 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 CDK5R2Q13319 367 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 AQP6Q13520 282 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 GBX1Q14549 363 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 SPCS2Q15005 226 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 LAIR1Q6GTX8 287 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 PIWIL3Q7Z3Z3 882 aaKnown RBP12.49□□□□□ -0.41
HIF3A-204ENST00000300862 OR52E4Q8NGH9 312 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 CYB5D2Q8WUJ1 264 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 UBE2FQ969M7 185 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 HHIPL1Q96JK4 782 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 HEPHQ9BQS7 1158 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 LINC00597Q9H2U6 94 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 MAGIXQ9H6Y5 334 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 GPN2Q9H9Y4 310 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-204ENST00000300862 CHD7Q9P2D1 2997 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 BAG5Q9UL15 447 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 PSME2Q9UL46 239 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 OBSL1O75147 1896 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 ZNF106Q9H2Y7 1883 aaKnown RBP12.49□□□□□ -0.41
HIF3A-204ENST00000300862 ARHGEF33A8MVX0 844 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 SGTAO43765 313 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 KCNK5O95279 499 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 FKBP9O95302 570 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 ETHE1O95571 254 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 DAPP51397 102 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 WNT3P56703 355 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 DEFB115Q30KQ5 88 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 GGTA1PQ4G0N0 100 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.49□□□□□ -0.41
HIF3A-204ENST00000300862 FKBP9P1Q75LS8 142 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 DDX53Q86TM3 631 aaKnown RBP12.49□□□□□ -0.41
HIF3A-204ENST00000300862 ZNF366Q8N895 744 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 RAB2BQ8WUD1 216 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 ZNF296Q8WUU4 475 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-204ENST00000300862 NELL1Q92832 810 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 TCEAL4Q96EI5 215 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 ALPK1Q96QP1 1244 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 NODALQ96S42 347 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 ORC6Q9Y5N6 252 aa12.49□□□□□ -0.41
HIF3A-204ENST00000300862 CCNDBP1O95273 360 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 NTRK1P04629 796 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 C8AP07357 584 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 MAP2K4P45985 399 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 HNMTP50135 292 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 PTPN5P54829 565 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 GP2P55259 537 aaKnown RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 EPS8Q12929 822 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 NAE1Q13564 534 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 OXA1LQ15070 435 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 SMN1Q16637 294 aaKnown RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 DUOXA1Q1HG43 343 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 TRIM16LQ309B1 348 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 ZNF362Q5T0B9 420 aaPredicted RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 OR2T5Q6IEZ7 315 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 CRTC3Q6UUV7 619 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 GDPD4Q6W3E5 623 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 HIPK1Q86Z02 1210 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 ABHD11Q8NFV4 315 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 OR2A12Q8NGT7 310 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 OR2T29Q8NH02 315 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 MAL2Q969L2 176 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 SH3KBP1Q96B97 665 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 TPD52L3Q96J77 140 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 C19orf43Q9BQ61 176 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 RIOK2Q9BVS4 552 aaKnown RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 FAM83DQ9H4H8 585 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 ERVK-18Q9QC07 812 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 SLC25A13Q9UJS0 675 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 PPIL1Q9Y3C6 166 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 SNX5Q9Y5X3 404 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 FADS2P1A8MWK0 482 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 ANGPTL1O95841 491 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 JUPP14923 745 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 MAPK1P28482 360 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 ALDH4A1P30038 563 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 PBLDP30039 288 aaPredicted RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 BDKRB1P46663 353 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 TMED10P49755 219 aaKnown RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 CTSCP53634 463 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 RAD23AP54725 363 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 LSM3P62310 102 aaKnown RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 DOC2AQ14183 400 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 PDE12Q6L8Q7 609 aaKnown RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 SHQ1Q6PI26 577 aaKnown RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 THOC6Q86W42 341 aaKnown RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 PTOV1Q86YD1 416 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 ZZZ3Q8IYH5 903 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 TCAIMQ8N3R3 496 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 PIK3C3Q8NEB9 887 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 GPR156Q8NFN8 814 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 FKBP10Q96AY3 582 aa12.48□□□□□ -0.41
HIF3A-204ENST00000300862 ZNF689Q96CS4 500 aaPredicted RBP12.48□□□□□ -0.41
HIF3A-204ENST00000300862 RAD21L1Q9H4I0 556 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms