RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 L1CAMP32004 1257 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 CRHR2Q13324 411 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 GNMTQ14749 295 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 LDLRAP1Q5SW96 308 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 HGSNATQ68CP4 663 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 IRF2BP2Q7Z5L9 587 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 FCGR1BQ92637 280 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ZBED6CLQ96FA7 236 aaPredicted RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 FXYD6Q9H0Q3 95 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 FAM198AQ9UFP1 575 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 NT5C1B-RDH14C9J2C7 533 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 E9PAM4 449 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 PI15O43692 258 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 AZGP1P25311 298 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 MAGEA8P43361 318 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 RRAS2P62070 204 aaPredicted RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 SLITRK4Q8IW52 837 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 CPNE9Q8IYJ1 553 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 OR6N1Q8NGY5 312 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 PLD4Q96BZ4 506 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MALSU1Q96EH3 234 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 PLK2Q9NYY3 685 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MYH1P12882 1939 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MYH2Q9UKX2 1941 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 C2orf92A0A1B0GVN3 265 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 DAPL1A0PJW8 107 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MEN1O00255 615 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ANGPTL1O95841 491 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ANXA3P12429 323 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 E2F1Q01094 437 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 DLG2Q15700 870 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 KHDC1LQ5JSQ8 128 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 NIPAL3Q6P499 406 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 RHBDF2Q6PJF5 856 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MMABQ96EY8 250 aaPredicted RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 GPATCH1Q9BRR8 931 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 TMEM100Q9NV29 134 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 TAS2R1Q9NYW7 299 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 BCL9O00512 1426 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 LRRIQ1Q96JM4 1722 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 KLRC4O43908 158 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ITGA10O75578 1167 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ESR1P03372 595 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ZNF136P52737 540 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 FAM110CQ1W6H9 321 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 KLHL22Q53GT1 634 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 OTOP2Q7RTS6 562 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 GIMAP5Q96F15 307 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 DMRTB1Q96MA1 342 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 CAMK1GQ96NX5 476 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 IPPKQ9H8X2 491 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MKKSQ9NPJ1 570 aaPredicted RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 SLC7A11Q9UPY5 501 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MEGF6O75095 1541 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ISPDA4D126 451 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 UGT1A1P22309 533 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 SNU13P55769 128 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 TAS2R40P59535 323 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 CRTC2Q53ET0 693 aaPredicted RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 CMC1Q7Z7K0 106 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ALYREFQ86V81 257 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 WDSUB1Q8N9V3 476 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 EVPLQ92817 2033 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 SLC22A18Q96BI1 424 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 CADM1Q9BY67 442 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 LRRC4CQ9HCJ2 640 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 PEX16Q9Y5Y5 336 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 PRR5-ARHGAP8B1AHC4 643 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 CLDN25C9JDP6 229 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 NPIPA2E9PIF3 369 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 NPIPA3F8WFD2 350 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 CHRM5P08912 532 aaPredicted RBP11.77□□□□□ -0.52
PCF11-201ENST00000298281 ZNF8P17098 575 aaPredicted RBP11.77□□□□□ -0.52
PCF11-201ENST00000298281 GNAZP19086 355 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 TACR2P21452 398 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 PTGER3P43115 390 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 RPL11P62913 178 aaKnown RBP11.77□□□□□ -0.52
PCF11-201ENST00000298281 ARHGAP8P85298 464 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 GNA12Q03113 381 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 PTP4A2Q12974 167 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 SLC1A5Q15758 541 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 PRAMEF19Q5SWL8 479 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 GPR157Q5UAW9 335 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 UNQ6126/PRO20091Q6UXV3 157 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 TMPRSS7Q7RTY8 843 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 OR8S1Q8NH09 359 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 C15orf40Q8WUR7 153 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 ACBD6Q9BR61 282 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 S100A14Q9HCY8 104 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 PCDHB16Q9NRJ7 776 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 PNPOQ9NVS9 261 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 ETAA1Q9NY74 926 aa11.77□□□□□ -0.52
PCF11-201ENST00000298281 AGPSO00116 658 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms