RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 C5orf22Q49AR2 442 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 NXNL2Q5VZ03 156 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.14■□□□□ 0.01
UBAP1-201ENST00000297661 UBQLNLQ8IYU4 475 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 SLC47A1Q96FL8 570 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 CEP295NLQ96MC4 621 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 ZNF583Q96ND8 569 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 TTYH2Q9BSA4 534 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 P2RY12Q9H244 342 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 ACTR8Q9H981 624 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 PRDM8Q9NQV8 689 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 SLC6A13Q9NSD5 602 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 GIMAP4Q9NUV9 329 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 QPCTLQ9NXS2 382 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 IL17CQ9P0M4 197 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 SATB2Q9UPW6 733 aa15.14■□□□□ 0.01
UBAP1-201ENST00000297661 WBP11Q9Y2W2 641 aaKnown RBP15.14■□□□□ 0.01
UBAP1-201ENST00000297661 PRRC2BQ5JSZ5 2229 aaKnown RBP15.13■□□□□ 0.01
UBAP1-201ENST00000297661 A0A1B0GVM2 712 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 ANKRD28O15084 1053 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 GSTA4O15217 222 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 RGS10O43665 173 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 SLC25A14O95258 325 aaPredicted RBP15.13■□□□□ 0.01
UBAP1-201ENST00000297661 ESR1P03372 595 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 GALTP07902 379 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 S100A5P33763 92 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 GRIK2Q13002 908 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 SIM2Q14190 667 aaPredicted RBP15.13■□□□□ 0.01
UBAP1-201ENST00000297661 SMN1Q16637 294 aaKnown RBP15.13■□□□□ 0.01
UBAP1-201ENST00000297661 SPANXN4Q5MJ08 99 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 C9orf50Q5SZB4 431 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 NCEH1Q6PIU2 408 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 GALNT5Q7Z7M9 940 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 ELMOD2Q8IZ81 293 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 ST6GAL2Q96JF0 529 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 SLC22A12Q96S37 553 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 HEBP1Q9NRV9 189 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 NUDT4Q9NZJ9 180 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 LHX3Q9UBR4 397 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 VPS9D1Q9Y2B5 631 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 DHRS7Q9Y394 339 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 XIRP2A4UGR9 3374 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 ERVH48-1M5A8F1 160 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 SMAD6O43541 496 aaKnown RBP15.13■□□□□ 0.01
UBAP1-201ENST00000297661 BNIP3LO60238 219 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 CYP4B1P13584 511 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 PFKLP17858 780 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 ADGRF1Q5T601 910 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 LYPD8Q6UX82 237 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 C10orf111Q8N326 155 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 TRIM63Q969Q1 353 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 ASB8Q9H765 288 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 AFF4Q9UHB7 1163 aaKnown RBP15.13■□□□□ 0.01
UBAP1-201ENST00000297661 LRFN2Q9ULH4 789 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 SNX6Q9UNH7 406 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 PCDHGB6Q9Y5F9 930 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 CHD9Q3L8U1 2897 aa15.13■□□□□ 0.01
UBAP1-201ENST00000297661 NUP214P35658 2090 aaPredicted RBP15.13■□□□□ 0.01
UBAP1-201ENST00000297661 AIREO43918 545 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 NPPAP01160 153 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 KRT6AP02538 564 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 KRT6BP04259 564 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 MVKQ03426 396 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 PRKCDQ05655 676 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 ANKRD46Q86W74 232 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 CADM2Q8N3J6 435 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 LIX1Q8N485 282 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 SETD9Q8NE22 299 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 OR2T12Q8NG77 320 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 OR5K1Q8NHB7 308 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 ANGPTL6Q8NI99 470 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 EHD3Q9NZN3 535 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 ADGRE2Q9UHX3 823 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 CLDN7O95471 211 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 UBL4AP11441 157 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 CACNG1Q06432 222 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 GCNT7Q6ZNI0 430 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 PRR23CQ6ZRP0 262 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 ADHFE1Q8IWW8 467 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 FAM20CQ8IXL6 584 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 SLC13A3Q8WWT9 602 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 JPH3Q8WXH2 748 aaPredicted RBP15.12■□□□□ 0.01
UBAP1-201ENST00000297661 NUAK2Q9H093 628 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 TM9SF3Q9HD45 589 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 WWOXQ9NZC7 414 aa15.12■□□□□ 0.01
UBAP1-201ENST00000297661 OR2A25A4D2G3 310 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 GAPDHSO14556 408 aaPredicted RBP15.11■□□□□ 0.01
UBAP1-201ENST00000297661 MED26O95402 600 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 C1QCP02747 245 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 PRKACBP22694 351 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 UGT2B10P36537 528 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 LIPAP38571 399 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 CSKP41240 450 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 CLCN4P51793 760 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 IL1RL1Q01638 556 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 PWP1Q13610 501 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 TAF12Q16514 161 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 SMU1Q2TAY7 513 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 RFX4Q33E94 735 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 ADGRG2Q8IZP9 1017 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms