RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 DNAJC22Q8N4W6 341 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 NKAPQ8N5F7 415 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 OR2L3Q8NG85 312 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 DLG3Q92796 817 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 MRRFQ96E11 262 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 EFHD1Q9BUP0 239 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 SPRTNQ9H040 489 aaPredicted RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 GPAMQ9HCL2 828 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 CPSF2Q9P2I0 782 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 PLCL2Q9UPR0 1127 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 L3MBTL1Q9Y468 752 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 LAMA5O15230 3695 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 PTPRQQ9UMZ3 2332 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 TARM1B6A8C7 271 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 E7ENX8 843 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 CPNE3O75131 537 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 OR2B3O76000 313 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 KLK3P07288 261 aaPredicted RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 LINGO3P0C6S8 592 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 ERGP11308 486 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 TCN2P20062 427 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 DLSTP36957 453 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 POU4F1Q01851 419 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 TAP2Q03519 686 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 SP140Q13342 867 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 ZNF460Q14592 562 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 ZC3H12BQ5HYM0 836 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 FCRL6Q6DN72 434 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 TMEM207Q6UWW9 146 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 MCATQ8IVS2 390 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 CEP97Q8IW35 865 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 ENDOVQ8N8Q3 282 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 MR1Q95460 341 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 ALKBH8Q96BT7 664 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 TSPAN17Q96FV3 270 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 PDLIM5Q96HC4 596 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 RBBP8Q99708 897 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 CHRNA10Q9GZZ6 450 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 CAB39LQ9H9S4 337 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 MRPS30Q9NP92 439 aaKnown RBP11.61□□□□□ -0.55
HMGB2-201ENST00000296503 LHX9Q9NQ69 397 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 TAC3Q9UHF0 121 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 PCDHB3Q9Y5E6 796 aa11.61□□□□□ -0.55
HMGB2-201ENST00000296503 SNRNP200O75643 2136 aaKnown RBP11.6□□□□□ -0.55
HMGB2-201ENST00000296503 ZNF749O43361 778 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 HCRTR1O43613 425 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 KATNA1O75449 491 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 FAM155BO75949 473 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 TSPAN12O95859 305 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 STAT5AP42229 794 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 KCNJ2P63252 427 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 YBX1P67809 324 aaKnown RBP11.6□□□□□ -0.55
HMGB2-201ENST00000296503 FAM199XQ6PEV8 388 aaPredicted RBP11.6□□□□□ -0.55
HMGB2-201ENST00000296503 CKAP2Q8WWK9 683 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 MCMBPQ9BTE3 642 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 DPH7Q9BTV6 452 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 ATG10Q9H0Y0 220 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 AKIRIN1Q9H9L7 192 aaPredicted RBP11.6□□□□□ -0.55
HMGB2-201ENST00000296503 TXLNGQ9NUQ3 528 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 ARL15Q9NXU5 204 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 EURLQ9NYK6 297 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 NINJ2Q9NZG7 142 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 ACTL7BQ9Y614 415 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 ANKRD12Q6UB98 2062 aa11.6□□□□□ -0.55
HMGB2-201ENST00000296503 ZFHX4Q86UP3 3567 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 UNC5CO95185 931 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 CCNDBP1O95273 360 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 GUCA1CO95843 209 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 C1QAP02745 245 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 HBQ1P09105 142 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 ACADSP16219 412 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 STMN1P16949 149 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 ZNF37AP17032 561 aaPredicted RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 WT1P19544 449 aaPredicted RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 ATP6V1C1P21283 382 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 CALB2P22676 271 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 IMPA1P29218 277 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 GABRA4P48169 554 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 PRDX1Q06830 199 aaKnown RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 NAB1Q13506 487 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 NAE1Q13564 534 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 PHKG1Q16816 387 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 WASHC2DQ5SRD0 308 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 AGTRAPQ6RW13 159 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 MBOAT1Q6ZNC8 495 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 SLC38A9Q8NBW4 561 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 MED8Q96G25 268 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 CYTH2Q99418 400 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 RNPEPL1Q9HAU8 725 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 POPDC3Q9HBV1 291 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 UTP6Q9NYH9 597 aaKnown RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 STOX2Q9P2F5 926 aaPredicted RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 CROTQ9UKG9 612 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 RALYQ9UKM9 306 aaKnown RBP11.59□□□□□ -0.55
HMGB2-201ENST00000296503 PCDHGA4Q9Y5G9 962 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 AP1M2Q9Y6Q5 423 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 A0A0J9YVX5 310 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 PDLIM1O00151 329 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 MEN1O00255 615 aa11.59□□□□□ -0.55
HMGB2-201ENST00000296503 PHGDHO43175 533 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms