RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 GJA4P35212 333 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 CLCN2P51788 898 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 RPS13P62277 151 aaKnown RBP13.52□□□□□ -0.24
NXF1-201ENST00000294172 SRSF11Q05519 484 aaKnown RBP13.52□□□□□ -0.24
NXF1-201ENST00000294172 ZNF33BQ06732 778 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 LAPTM5Q13571 262 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 RUNX3Q13761 415 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 PON2Q15165 354 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 DUOXA1Q1HG43 343 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 HKDC1Q2TB90 917 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 TMEM52BQ4KMG9 183 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 EGFLAMQ63HQ2 1017 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 MED27Q6P2C8 311 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 RBM44Q6ZP01 1051 aaKnown RBP13.52□□□□□ -0.24
NXF1-201ENST00000294172 STK32CQ86UX6 486 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 OFCC1Q8IZS5 231 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 CPA6Q8N4T0 437 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 DHRSXQ8N5I4 330 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 C2orf73Q8N5S3 287 aaPredicted RBP13.52□□□□□ -0.24
NXF1-201ENST00000294172 TRIML2Q8N7C3 387 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 OR9A1PQ8NGU1 263 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 NCSTNQ92542 709 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 FCRL1Q96LA6 429 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 SAMD11Q96NU1 681 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 C8orf4Q9NR00 106 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 NDUFA13Q9P0J0 144 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 DYRK1BQ9Y463 629 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 FADS3Q9Y5Q0 445 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 GNG14A0A1W2PPG7 69 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 EVPLLA8MZ36 301 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 GNGT2O14610 69 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 KAT7O95251 611 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 CST1P01037 141 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 PCCBP05166 539 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 ANXA4P09525 319 aaPredicted RBP13.52□□□□□ -0.25
NXF1-201ENST00000294172 LAMP1P11279 417 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 IST1P53990 364 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 MTAPQ13126 283 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 ZIK1Q3SY52 487 aaPredicted RBP13.52□□□□□ -0.25
NXF1-201ENST00000294172 TTC33Q6PID6 262 aaPredicted RBP13.52□□□□□ -0.25
NXF1-201ENST00000294172 FAM83HQ6ZRV2 1179 aaPredicted RBP13.52□□□□□ -0.25
NXF1-201ENST00000294172 CALHM3Q86XJ0 350 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 YAF2Q8IY57 180 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 KLHDC8AQ8IYD2 350 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 CLECL1Q8IZS7 167 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 CLEC4FQ8N1N0 589 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 NMD3Q96D46 503 aaKnown RBP13.52□□□□□ -0.25
NXF1-201ENST00000294172 HIC2Q96JB3 615 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 ZNF514Q96K75 400 aaPredicted RBP13.52□□□□□ -0.25
NXF1-201ENST00000294172 HAUS8Q9BT25 410 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 BRF2Q9HAW0 419 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 HCN2Q9UL51 889 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 PLAGL1Q9UM63 463 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 COMMD3-BMI1R4GMX3 469 aa13.52□□□□□ -0.25
NXF1-201ENST00000294172 UPK1AO00322 258 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 HOXB9P17482 250 aaPredicted RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 MYF6P23409 242 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 CALRP27797 417 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 GZMMP51124 257 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 NR1H2P55055 460 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 CDH15P55291 814 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 RAE1P78406 368 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 MEF2AQ02078 507 aaPredicted RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 SLBPQ14493 270 aaKnown RBP eCLIP13.51□□□□□ -0.25
NXF1-201ENST00000294172 RBBP5Q15291 538 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 DPY19L1Q2PZI1 675 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 XKR5Q6UX68 686 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 ZNF551Q7Z340 670 aaPredicted RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 GPR149Q86SP6 731 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 PNPT1Q8TCS8 783 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 SH3KBP1Q96B97 665 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 REXO5Q96IC2 774 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 IL17FQ96PD4 163 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 HHIPQ96QV1 700 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 PLA2G2FQ9BZM2 168 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 CLK4Q9HAZ1 481 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 VCX3AQ9NNX9 186 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 DCAF13Q9NV06 445 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 ZNF639Q9UID6 485 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 ASF1AQ9Y294 204 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 BTBD3Q9Y2F9 522 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 IGLON5A6NGN9 336 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 CLIC1O00299 241 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 SAP18O00422 153 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 YY2O15391 372 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 PCDH8O95206 1070 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 GBAP04062 536 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 C7P10643 843 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 HSD3B1P14060 373 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 PCSK2P16519 638 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 ENGP17813 658 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 HSD3B2P26439 372 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 CAPGP40121 348 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 WNT3P56703 355 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 ABHD18Q0P651 414 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 PPP1R8Q12972 351 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 SHHQ15465 462 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 CYBRD1Q53TN4 286 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 ZCCHC8Q6NZY4 707 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 HEATR4Q86WZ0 1026 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms