RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ERVK-6Q9BXR3 956 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 RCOR3Q9P2K3 495 aaPredicted RBP15.74■□□□□ 0.11
SSRP1-202ENST00000293880 OR6C75A6NL08 312 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 E2F3O00716 465 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 CLIC3O95833 236 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 CSF2P04141 144 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 CFHP08603 1231 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 OGNP20774 298 aaKnown RBP15.74■□□□□ 0.11
SSRP1-202ENST00000293880 ACADVLP49748 655 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 ERVK-21P61565 698 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 VSTM1Q6UX27 236 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 DCAKDQ8WVC6 231 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 LYARQ9NX58 379 aaKnown RBP15.74■□□□□ 0.11
SSRP1-202ENST00000293880 DERAQ9Y315 318 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 MAP2K4P45985 399 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 NKX2-5P52952 324 aaPredicted RBP15.73■□□□□ 0.11
SSRP1-202ENST00000293880 JAGN1Q8N5M9 183 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 ERVK-11Q9UQG0 969 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 VWDEQ8N2E2 1590 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 SLC38A8A6NNN8 435 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 GPR25O00155 361 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 MLLT1Q03111 559 aaPredicted RBP15.73■□□□□ 0.11
SSRP1-202ENST00000293880 DAG1Q14118 895 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 SFT2D3Q587I9 215 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 ATAD3CQ5T2N8 411 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 PAQR7Q86WK9 346 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 DEFB119Q8N690 84 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 RC3H2Q9HBD1 1191 aaKnown RBP15.73■□□□□ 0.11
SSRP1-202ENST00000293880 ADAP2Q9NPF8 381 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 FBXW11Q9UKB1 542 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 NOGQ13253 232 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 CYTH4Q9UIA0 394 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 A8MU76 341 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 CYB5AP00167 134 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 HLA-DQB2P05538 268 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 VAMP1P23763 118 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 ANKDD1AQ495B1 522 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 OTOP2Q7RTS6 562 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 COL21A1Q96P44 957 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 SEC61A2Q9H9S3 476 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 E7EQ34 232 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 C8GP07360 202 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 TAS2R39P59534 338 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 RHDQ02161 417 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 CBLBQ13191 982 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 ADAM15Q13444 863 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 EIPR1Q53HC9 387 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 ARSIQ5FYB1 569 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 ERI1Q8IV48 349 aaKnown RBP15.73■□□□□ 0.11
SSRP1-202ENST00000293880 PEX13Q92968 403 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 GIMAP2Q9UG22 337 aa15.73■□□□□ 0.11
SSRP1-202ENST00000293880 NOP16Q9Y3C1 178 aaKnown RBP15.73■□□□□ 0.11
SSRP1-202ENST00000293880 B4DGG1 531 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 PSMA6P60900 246 aaKnown RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 DSTNP60981 165 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 SLBPQ14493 270 aaKnown RBP eCLIP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 LRRN1Q6UXK5 716 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 CASTOR1Q8WTX7 329 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 DEFB118Q96PH6 123 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 SLC38A3Q99624 504 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 MKKSQ9NPJ1 570 aaPredicted RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 NUDT15Q9NV35 164 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 REM1O75628 298 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 TBX18O95935 607 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 JUNP05412 331 aaKnown RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 STOMP27105 288 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 DSC3Q14574 896 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 TMEM53Q6P2H8 277 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 BEND7Q8N7W2 519 aaPredicted RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 OR5T1Q8NG75 326 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF641Q96N77 438 aaPredicted RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 MIPEPQ99797 713 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 DPAGT1Q9H3H5 408 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 TAS2R3Q9NYW6 316 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 DNAJC27Q9NZQ0 273 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 MYBPHLA2RUH7 354 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 TMEM63AO94886 807 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 FARS2O95363 451 aaKnown RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 CCNOP22674 350 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 DNAJA1P31689 397 aaKnown RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 DUS1LQ6P1R4 473 aaKnown RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 TLE6Q9H808 572 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 DEC1Q9P2X7 70 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 CPQQ9Y646 472 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 TMEM88BA6NKF7 163 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 B4GALT4O60513 344 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 CCKBRP32239 447 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 RPL19P84098 196 aaKnown RBP15.72■□□□□ 0.11
SSRP1-202ENST00000293880 LDB2O43679 373 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 ITGA10O75578 1167 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 ASLP04424 464 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF81P51508 661 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 GAD2Q05329 585 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 TEAD4Q15561 434 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 PAQR3Q6TCH7 311 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 NUS1Q96E22 293 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 SLC7A8Q9UHI5 535 aa15.72■□□□□ 0.11
SSRP1-202ENST00000293880 A0A1W2PPK0 400 aa15.71■□□□□ 0.11
SSRP1-202ENST00000293880 SLC22A1O15245 554 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms