RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PCDHGB7Q9Y5F8 929 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 FAM172BPA6NC97 362 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 M0R2N6 131 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 PRAMEF11O60813 436 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 TRMUO75648 421 aaKnown RBP16.83■□□□□ 0.28
SHANK1-201ENST00000293441 DGKQP52824 942 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 ANKFN1Q8N957 763 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 TRIB2Q92519 343 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 SPATA6Q9NWH7 488 aaPredicted RBP16.83■□□□□ 0.28
SHANK1-201ENST00000293441 DNAJB9Q9UBS3 223 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 CFL2Q9Y281 166 aa16.83■□□□□ 0.28
SHANK1-201ENST00000293441 HEXBP07686 556 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 ADNP2Q6IQ32 1131 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 C14orf80Q86SX3 495 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 CAMK1GQ96NX5 476 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 FKBP7Q9Y680 259 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.82■□□□□ 0.28
SHANK1-201ENST00000293441 LINGO2Q7L985 606 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 AMIGO3Q86WK7 504 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 UBE2J2Q8N2K1 259 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 FETUBQ9UGM5 382 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 PRPF38BQ5VTL8 546 aaKnown RBP16.82■□□□□ 0.28
SHANK1-201ENST00000293441 OR9A1PQ8NGU1 263 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 PHOSPHO1Q8TCT1 267 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 OR51B5Q9H339 312 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 GIN1Q9NXP7 522 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 B4GALT6Q9UBX8 382 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 CA14Q9ULX7 337 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 GRIP1Q9Y3R0 1128 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 LEFTY1O75610 366 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 ADGRE1Q14246 886 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 PLET1Q6UQ28 207 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 ZDHHC24Q6UX98 284 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 P2RY8Q86VZ1 359 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 OR52E4Q8NGH9 312 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 PKP4Q99569 1192 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 ZDHHC2Q9UIJ5 367 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 TBC1D24Q9ULP9 559 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 AKAP12Q02952 1782 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 CDH1P12830 882 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 MAP3K8P41279 467 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 MAGEA11P43364 429 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 EIF1AXP47813 144 aaKnown RBP16.82■□□□□ 0.28
SHANK1-201ENST00000293441 LBX1P52954 281 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 TMEM115Q12893 351 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-201ENST00000293441 SERINC3Q13530 473 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 DECR1Q16698 335 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 SWI5Q1ZZU3 235 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 LRRC58Q96CX6 371 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 DENND2DQ9H6A0 471 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-201ENST00000293441 Q9N2J8 555 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 LTBP3Q9NS15 1303 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
SHANK1-201ENST00000293441 GRXCR1A8MXD5 290 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 NPIPA5E9PKD4 350 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 AZGP1P25311 298 aaKnown RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 RPL6Q02878 288 aaKnown RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 E2F2Q14209 437 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 DUOXA1Q1HG43 343 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 NPIPA1Q9UND3 350 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 RNF11Q9Y3C5 154 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 ZNF142P52746 1687 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 OAS1P00973 400 aaKnown RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 AP3S2P59780 193 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 ID2Q02363 134 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 GALNT2Q10471 571 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 ZNF648Q5T619 568 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 ULK3Q6PHR2 472 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 SPHK2Q9NRA0 654 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 SIX4Q9UIU6 781 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 DKKL1Q9UK85 242 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 GBX2P52951 348 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 TMIGD1Q6UXZ0 262 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 TMPRSS9Q7Z410 1059 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 ZC3HC1Q86WB0 502 aaKnown RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 SAMD11Q96NU1 681 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 RBCK1Q9BYM8 510 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 SFXN1Q9H9B4 322 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 PCDHGB5Q9Y5G0 923 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 MANBAO00462 879 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 PTCHD3Q3KNS1 767 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 AGTRAPQ6RW13 159 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 CEACAM20Q6UY09 585 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 ARMC10Q8N2F6 343 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 DGCR14Q96DF8 476 aaKnown RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 COPS4Q9BT78 406 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 B3GNT4Q9C0J1 378 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 KCNH6Q9H252 994 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 FAM159BA6NKW6 160 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 WASHC1A8K0Z3 465 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 WASH3PC4AMC7 463 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 PIRO00625 290 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 PDCD5O14737 125 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 LINGO3P0C6S8 592 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 MATN1P21941 496 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 WASH2PQ6VEQ5 465 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 ADAD1Q96M93 576 aaKnown RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 CADM1Q9BY67 442 aaKnown RBP16.81■□□□□ 0.28
SHANK1-201ENST00000293441 A0A1W2PP55 124 aa16.81■□□□□ 0.28
SHANK1-201ENST00000293441 ZNF627Q7L945 461 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms