RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 PNMA8BQ9ULN7 279 aaPredicted RBP21.27■■□□□ 1
CCDC7-201ENST00000277657 RUVBL1Q9Y265 456 aaKnown RBP21.27■■□□□ 1
CCDC7-201ENST00000277657 MRPS17Q9Y2R5 130 aaKnown RBP21.27■■□□□ 1
CCDC7-201ENST00000277657 KRBA1A5PL33 1030 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 OR52A4PA6NMU1 304 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 PRAMEF26H0Y7S4 382 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 PGRP06401 933 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 HSD17B1P14061 328 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 OXTRP30559 389 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 PTDSS1P48651 473 aaKnown RBP21.26■□□□□ 0.99
CCDC7-201ENST00000277657 RAB28P51157 221 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 RPS13P62277 151 aaKnown RBP21.26■□□□□ 0.99
CCDC7-201ENST00000277657 SPANXN4Q5MJ08 99 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 ABRAXAS1Q6UWZ7 409 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 WASH2PQ6VEQ5 465 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 DHDDSQ86SQ9 333 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 C17orf64Q86WR6 236 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.26■□□□□ 0.99
CCDC7-201ENST00000277657 UBE2E3Q969T4 207 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 TESCQ96BS2 214 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 TMEM74Q96NL1 305 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 TSSK3Q96PN8 268 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 PELI2Q9HAT8 420 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 LTB4R2Q9NPC1 389 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 WASH6PQ9NQA3 447 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 TAC3Q9UHF0 121 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 SCAMP1O15126 338 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 ANP32DO95626 131 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 STARD6P59095 220 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 ACSM2AQ08AH3 577 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 C6orf10Q5SRN2 563 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 ACSM2BQ68CK6 577 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 TSTD1Q8NFU3 115 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 ABHD11Q8NFV4 315 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 CHTF18Q8WVB6 975 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 TSACCQ96A04 125 aaPredicted RBP21.26■□□□□ 0.99
CCDC7-201ENST00000277657 ACAT2Q9BWD1 397 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 RAB11FIP5Q9BXF6 653 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 DMRT3Q9NQL9 472 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 SCHIP1Q9P0W5 487 aaPredicted RBP21.26■□□□□ 0.99
CCDC7-201ENST00000277657 WNT16Q9UBV4 365 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 TBC1D29Q9UFV1 150 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 ANGPTL2Q9UKU9 493 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 PCOLCE2Q9UKZ9 415 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 DMTF1Q9Y222 760 aa21.26■□□□□ 0.99
CCDC7-201ENST00000277657 MTHFD1P11586 935 aaKnown RBP21.25■□□□□ 0.99
CCDC7-201ENST00000277657 PKLRP30613 574 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 PIK3CBP42338 1070 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 PWP1Q13610 501 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 NANOGP8Q6NSW7 305 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 Q6ZSR6 202 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 HID1Q8IV36 788 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 BHLHE22Q8NFJ8 381 aaPredicted RBP21.25■□□□□ 0.99
CCDC7-201ENST00000277657 DNAJB14Q8TBM8 379 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 GTF2H4Q92759 462 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 PCDHAC1Q9H158 963 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 NANOGQ9H9S0 305 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 SIRT5Q9NXA8 310 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 PPT2Q9UMR5 302 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 HEBP2Q9Y5Z4 205 aa21.25■□□□□ 0.99
CCDC7-201ENST00000277657 LRP4O75096 1905 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 C15orf38-AP3S2A0A0A6YYH1 394 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 PRMT3O60678 531 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 CD6P30203 668 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 RABIFP47224 123 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 C21orf58P58505 322 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 SRP54P61011 504 aaKnown RBP21.24■□□□□ 0.99
CCDC7-201ENST00000277657 RAE1P78406 368 aaKnown RBP21.24■□□□□ 0.99
CCDC7-201ENST00000277657 MEF2AQ02078 507 aaPredicted RBP21.24■□□□□ 0.99
CCDC7-201ENST00000277657 SPIN4Q56A73 249 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 TMIGD1Q6UXZ0 262 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 ARPINQ7Z6K5 226 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 KRT78Q8N1N4 520 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 ZNF740Q8NDX6 193 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 OR2L8Q8NGY9 312 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 SH3KBP1Q96B97 665 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 BIRC7Q96CA5 298 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 EGLN2Q96KS0 407 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 NMRK1Q9NWW6 199 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 H3BNX3 289 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 SESN3P58005 492 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 KRT33BQ14525 404 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 UBXN2BQ14CS0 331 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 MAPKAPK3Q16644 382 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 ALG11Q2TAA5 492 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 GALNT18Q6P9A2 607 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 C1orf52Q8N6N3 182 aaKnown RBP21.24■□□□□ 0.99
CCDC7-201ENST00000277657 OR52E1Q8NGJ3 308 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 NRG4Q8WWG1 115 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 EBPLQ9BY08 206 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 GMPR2Q9P2T1 348 aaKnown RBP21.24■□□□□ 0.99
CCDC7-201ENST00000277657 NEUROG3Q9Y4Z2 214 aa21.24■□□□□ 0.99
CCDC7-201ENST00000277657 MYO1DO94832 1006 aa21.23■□□□□ 0.99
CCDC7-201ENST00000277657 PRPS1L1P21108 318 aa21.23■□□□□ 0.99
CCDC7-201ENST00000277657 AK4P27144 223 aaPredicted RBP21.23■□□□□ 0.99
CCDC7-201ENST00000277657 PSMB5P28074 263 aa21.23■□□□□ 0.99
CCDC7-201ENST00000277657 NUDT1P36639 197 aa21.23■□□□□ 0.99
CCDC7-201ENST00000277657 PHC1P78364 1004 aa21.23■□□□□ 0.99
CCDC7-201ENST00000277657 RABL3Q5HYI8 236 aa21.23■□□□□ 0.99
CCDC7-201ENST00000277657 RNF111Q6ZNA4 994 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms