RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 CNOT10Q9H9A5 744 aaKnown RBP12.22□□□□□ -0.45
SS18-202ENST00000269138 FANCEQ9HB96 536 aa12.22□□□□□ -0.45
SS18-202ENST00000269138 STARD5Q9NSY2 213 aa12.22□□□□□ -0.45
SS18-202ENST00000269138 DNAJC11Q9NVH1 559 aa12.22□□□□□ -0.45
SS18-202ENST00000269138 ANKMY1Q9P2S6 941 aa12.22□□□□□ -0.45
SS18-202ENST00000269138 DCDC2Q9UHG0 476 aa12.22□□□□□ -0.45
SS18-202ENST00000269138 SERTAD3Q9UJW9 196 aa12.22□□□□□ -0.45
SS18-202ENST00000269138 DYRK1BQ9Y463 629 aa12.22□□□□□ -0.45
SS18-202ENST00000269138 FEZF1A0PJY2 475 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 E7EQ34 232 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 H0YGG7 62 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 LCMT2O60294 686 aaKnown RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 OR2B3O76000 313 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 STK17BO94768 372 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 IPO13O94829 963 aaKnown RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 STATHP02808 62 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 GSTA1P08263 222 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 H2AFXP16104 143 aaPredicted RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 VARSP26640 1264 aaKnown RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 CCR8P51685 355 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 ITGA1P56199 1179 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 VSX2P58304 361 aaPredicted RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 ARF3P61204 181 aaPredicted RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 CDC16Q13042 620 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 NAA25Q14CX7 972 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 TGIF1Q15583 401 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 ZC3H12BQ5HYM0 836 aaKnown RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 SLCO4C1Q6ZQN7 724 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 TIPARPQ7Z3E1 657 aaKnown RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 TMPRSS11BQ86T26 416 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 LCA5Q86VQ0 697 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 BPHLQ86WA6 291 aaPredicted RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 TMEM126BQ8IUX1 230 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 SLC38A9Q8NBW4 561 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 OR8K5Q8NH50 307 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 ZCCHC14Q8WYQ9 949 aaKnown RBP12.21□□□□□ -0.45
SS18-202ENST00000269138 OR2A5Q96R48 311 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 ZFYVE21Q9BQ24 234 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 SELENOSQ9BQE4 189 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 ZPBPQ9BS86 351 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 ULBP3Q9BZM4 244 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 ACSS2Q9NR19 701 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 KCNE2Q9Y6J6 123 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 IGF2RP11717 2491 aa12.21□□□□□ -0.45
SS18-202ENST00000269138 A8MT66 165 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 K7EPI3 171 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 COPEO14579 308 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.46
SS18-202ENST00000269138 ZNF749O43361 778 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 DLX3O60479 287 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 SMIM24O75264 130 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 GLRA3O75311 464 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 SPAG7O75391 227 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 SCRG1O75711 98 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 DLGAP3O95886 979 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 EIF2S1P05198 315 aaKnown RBP12.21□□□□□ -0.46
SS18-202ENST00000269138 EZRP15311 586 aaKnown RBP12.21□□□□□ -0.46
SS18-202ENST00000269138 HRH2P25021 359 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 EEF1DP29692 281 aaKnown RBP12.21□□□□□ -0.46
SS18-202ENST00000269138 CRHR1P34998 444 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 BCL6P41182 706 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 CASP8Q14790 479 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 PDK4Q16654 411 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 WASHC2DQ5SRD0 308 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 CYB5D1Q6P9G0 228 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 LRRC70Q7Z2Q7 622 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 TEX9Q8N6V9 391 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 ZNF655Q8N720 491 aaPredicted RBP12.21□□□□□ -0.46
SS18-202ENST00000269138 BANPQ8N9N5 519 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 GALNT6Q8NCL4 622 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 ZNF285Q96NJ3 590 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 CNTNAP3BQ96NU0 1288 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 CNTNAP3Q9BZ76 1288 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 CENPHQ9H3R5 247 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 AKIRIN1Q9H9L7 192 aaPredicted RBP12.21□□□□□ -0.46
SS18-202ENST00000269138 IRAK4Q9NWZ3 460 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 OPTCQ9UBM4 332 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 ACSL6Q9UKU0 697 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 RAXQ9Y2V3 346 aa12.21□□□□□ -0.46
SS18-202ENST00000269138 TMEM184BQ9Y519 407 aaPredicted RBP12.21□□□□□ -0.46
SS18-202ENST00000269138 SPTBP11277 2137 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 PLIN3O60664 434 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 PROCP04070 461 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 C1GALT1C1LP0DN25 315 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 GNAZP19086 355 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 CCT5P48643 541 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 PCBP4P57723 403 aaKnown RBP12.2□□□□□ -0.46
SS18-202ENST00000269138 RELAQ04206 551 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 PCBP2Q15366 365 aaKnown RBP eCLIP12.2□□□□□ -0.469e-6■□□□□ 8.7
SS18-202ENST00000269138 RPS27LQ71UM5 84 aaKnown RBP12.2□□□□□ -0.46
SS18-202ENST00000269138 VN1R4Q7Z5H5 301 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 GPR135Q8IZ08 494 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 KDF1Q8NAX2 398 aaPredicted RBP12.2□□□□□ -0.46
SS18-202ENST00000269138 SNIP1Q8TAD8 396 aaKnown RBP12.2□□□□□ -0.46
SS18-202ENST00000269138 MOCOSQ96EN8 888 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 MACROD1Q9BQ69 325 aa12.2□□□□□ -0.46
SS18-202ENST00000269138 PELI2Q9HAT8 420 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms