RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CTSOP43234 321 aaPredicted RBP14.98□□□□□ -0.01
TIMP3-201ENST00000266085 DSTNP60981 165 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 BLMHQ13867 455 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 RNF220Q5VTB9 566 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 STEAP4Q687X5 459 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 ANKLE1Q8NAG6 615 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 TMEM174Q8WUU8 243 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 KLHDC7BQ96G42 594 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 ACTL7AQ9Y615 435 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 ARRB1P49407 418 aaPredicted RBP14.98□□□□□ -0.01
TIMP3-201ENST00000266085 ZNF311Q5JNZ3 666 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 ZNF648Q5T619 568 aaPredicted RBP14.98□□□□□ -0.01
TIMP3-201ENST00000266085 DDI2Q5TDH0 399 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 SLC8B1Q6J4K2 584 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 GPR153Q6NV75 609 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 HDDC2Q7Z4H3 204 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 AVL9Q8NBF6 648 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 KLHDC9Q8NEP7 349 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 RFKQ969G6 155 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 CSNK1G1Q9HCP0 422 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 FAM120CQ9NX05 1096 aaKnown RBP14.98□□□□□ -0.01
TIMP3-201ENST00000266085 ACTR3BQ9P1U1 418 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 OAZ3Q9UMX2 235 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 DGKBQ9Y6T7 804 aa14.98□□□□□ -0.01
TIMP3-201ENST00000266085 PRSS51A0A1B0GVH4 220 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CD68P34810 354 aaPredicted RBP14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CLCN4P51793 760 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 SRP54P61011 504 aaKnown RBP14.97□□□□□ -0.01
TIMP3-201ENST00000266085 ABHD18Q0P651 414 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 RAPSNQ13702 412 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 DAG1Q14118 895 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 ARHGAP22Q7Z5H3 698 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CEP97Q8IW35 865 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 OR5AK3PQ8NH89 298 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 POLR2J3Q9H1A7 115 aaKnown RBP14.97□□□□□ -0.01
TIMP3-201ENST00000266085 MCM8Q9UJA3 840 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CHST10O43529 356 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 NOBOXO60393 691 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 TSC22D2O75157 780 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 GMPRP36959 345 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 DUOXA1Q1HG43 343 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 C6orf136Q5SQH8 315 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 NCEH1Q6PIU2 408 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 ABHD13Q7L211 337 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 SLCO6A1Q86UG4 719 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 TRPV3Q8NET8 790 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CAMK1GQ96NX5 476 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CXCL16Q9H2A7 254 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CXorf21Q9HAI6 301 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CD320Q9NPF0 282 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 A0A1W2PQU0 124 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 ALPPP05187 535 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CD1DP15813 335 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 RHDQ02161 417 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 KCNC3Q14003 757 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 DENND5AQ6IQ26 1287 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 JAZF1Q86VZ6 243 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 TRAM1L1Q8N609 369 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 YIPF4Q9BSR8 244 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 TYRP1P17643 537 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 RPS21P63220 83 aaKnown RBP14.97□□□□□ -0.01
TIMP3-201ENST00000266085 EIPR1Q53HC9 387 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 XKR4Q5GH76 650 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 FCRL4Q96PJ5 515 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 MTG2Q9H4K7 406 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 TPT1P8Q9HAU6 139 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 MRPL39Q9NYK5 338 aaKnown RBP14.97□□□□□ -0.01
TIMP3-201ENST00000266085 P2RX2Q9UBL9 471 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 GMEB2Q9UKD1 530 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 CDC14AQ9UNH5 594 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 PCDHB11Q9Y5F2 797 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 NUMA1Q14980 2115 aa14.97□□□□□ -0.01
TIMP3-201ENST00000266085 EIF2B2P49770 351 aaKnown RBP14.96□□□□□ -0.01
TIMP3-201ENST00000266085 RPS13P62277 151 aaKnown RBP14.96□□□□□ -0.01
TIMP3-201ENST00000266085 TARDBPQ13148 414 aaKnown RBP eCLIP14.96□□□□□ -0.01
TIMP3-201ENST00000266085 DSC3Q14574 896 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 PAQR9Q6ZVX9 377 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 CHST14Q8NCH0 376 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 SLC2A4RGQ9NR83 387 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 ACSL5Q9ULC5 683 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 SRCP12931 536 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 IL4RP24394 825 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 DIO3P55073 304 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 TAS2R50P59544 299 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 MERTKQ12866 999 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 RABL3Q5HYI8 236 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 TSPAN33Q86UF1 283 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 PMEPA1Q969W9 287 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 ART5Q96L15 291 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 NSUN5Q96P11 429 aaKnown RBP14.96□□□□□ -0.01
TIMP3-201ENST00000266085 ELL3Q9HB65 397 aaPredicted RBP14.96□□□□□ -0.01
TIMP3-201ENST00000266085 TRMUO75648 421 aaKnown RBP14.96□□□□□ -0.01
TIMP3-201ENST00000266085 ACRV1P26436 265 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 ARCN1P48444 511 aaKnown RBP14.96□□□□□ -0.01
TIMP3-201ENST00000266085 PYDC2Q56P42 97 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 KLHDC10Q6PID8 442 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 C6orf89Q6UWU4 347 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 TICAM1Q8IUC6 712 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 MOCOSQ96EN8 888 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 NEUROD4Q9HD90 331 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms