RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 A3GALT2U3KPV4 340 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 UBA6A0AVT1 1052 aaPredicted RBP8.52□□□□□ -1.04
VAPB-201ENST00000265619 SEC22BO75396 215 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 CPB1P15086 417 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 LBPP18428 481 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 GPC1P35052 558 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 RGS6P49758 472 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 SLC10A6Q3KNW5 377 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 ZC3H12BQ5HYM0 836 aaKnown RBP8.52□□□□□ -1.04
VAPB-201ENST00000265619 SLC35F1Q5T1Q4 408 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 C1orf74Q96LT6 269 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 FOPNLQ96NB1 174 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 MRPL45Q9BRJ2 306 aaKnown RBP8.52□□□□□ -1.04
VAPB-201ENST00000265619 DPCDQ9BVM2 203 aaPredicted RBP8.52□□□□□ -1.04
VAPB-201ENST00000265619 ABCG4Q9H172 646 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 MUC13Q9H3R2 512 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 ELOVL6Q9H5J4 265 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 IFT46Q9NQC8 304 aa8.52□□□□□ -1.04
VAPB-201ENST00000265619 PLXNA1Q9UIW2 1896 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 CASTOR2A6NHX0 329 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 PCDH17O14917 1159 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 AZIN1O14977 448 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 RNGTTO60942 597 aaKnown RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 ASGR1P07306 291 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 VASPP50552 380 aaPredicted RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 CDKN2DP55273 166 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 ERVFC1P60507 584 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 SP3Q02447 781 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 CACNB2Q08289 660 aaPredicted RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 ATRAIDQ6UW56 229 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 STPG2Q8N412 459 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 ARL6IP6Q8N6S5 226 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 NPWQ8N729 165 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 TTC29Q8NA56 475 aaPredicted RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 SETD6Q8TBK2 473 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 NETO1Q8TDF5 533 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 ESAMQ96AP7 390 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 APOL4Q9BPW4 351 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 TSEN34Q9BSV6 310 aaKnown RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 CNPPD1Q9BV87 410 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 BCO2Q9BYV7 579 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 SLC22A4Q9H015 551 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 NIPAL2Q9H841 368 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 ZNF451Q9Y4E5 1061 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 LGALS8O00214 317 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 PTP4A3O75365 173 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 B3GALT4O96024 378 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 POMCP01189 267 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 SYPP08247 313 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 EFNA1P20827 205 aaPredicted RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 AFF1P51825 1210 aaKnown RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 MXD1Q05195 221 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 GTF2H3Q13889 308 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 KCNA10Q16322 511 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 UGP2Q16851 508 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 GOLGA7BQ2TAP0 167 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 PCID2Q5JVF3 399 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 MORN1Q5T089 497 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 CPZQ66K79 652 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 ISCA2Q86U28 154 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 PTGR2Q8N8N7 351 aaPredicted RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 CDYL2Q8N8U2 506 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 CEP76Q8TAP6 659 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 GGHQ92820 318 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 GPR137Q96N19 417 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 GTPBP2Q9BX10 602 aaKnown RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 PPA2Q9H2U2 334 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 MIXL1Q9H2W2 232 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 FZD8Q9H461 694 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 SEMA4BQ9NPR2 832 aaPredicted RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 RAD18Q9NS91 495 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 MRPL39Q9NYK5 338 aaKnown RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 NLKQ9UBE8 527 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 FAM8A1Q9UBU6 413 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 ZNF225Q9UK10 706 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 NDRG4Q9ULP0 352 aaKnown RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 COPS3Q9UNS2 423 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 ZNF175Q9Y473 711 aa8.52□□□□□ -1.05
VAPB-201ENST00000265619 PRRC2BQ5JSZ5 2229 aaKnown RBP8.52□□□□□ -1.05
VAPB-201ENST00000265619 PNMA8CA0A1B0GUJ8 204 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 MYO1GB0I1T2 1018 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 LINC00587B1AMM8 73 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 NT5C1B-RDH14C9J2C7 533 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 I6L893 689 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 PITPNM1O00562 1244 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 DPYSL4O14531 572 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 CA12O43570 354 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 SLC22A3O75751 556 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 HRGP04196 525 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 GLAP06280 429 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 IGFBP6P24592 240 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 KCNQ1P51787 676 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 GRIK2Q13002 908 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 EXOSC2Q13868 293 aaKnown RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 FGFBP1Q14512 234 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 FAM171A1Q5VUB5 890 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 KIAA0319Q5VV43 1072 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 KDM4DQ6B0I6 523 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 ANKRD54Q6NXT1 300 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms