RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ATP4BP51164 291 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 CDK6Q00534 326 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 CCNIQ14094 377 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 SLC39A5Q6ZMH5 540 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 ERN2Q76MJ5 926 aaKnown RBP13.6□□□□□ -0.23
CDH3-201ENST00000264012 NRSN1Q8IZ57 195 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 ATP6V1C2Q8NEY4 427 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 OR4E2Q8NGC2 313 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 GLYATL1Q969I3 302 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 LRIG1Q96JA1 1093 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 CAMK1GQ96NX5 476 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 CHD4Q14839 1912 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 M0QX08 132 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 TSPAN6O43657 245 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 MASP1P48740 699 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 KCNC3Q14003 757 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 CXorf57Q6NSI4 855 aaKnown RBP13.6□□□□□ -0.23
CDH3-201ENST00000264012 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
CDH3-201ENST00000264012 SCD5Q86SK9 330 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 OR4C6Q8NH72 309 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 MOCOSQ96EN8 888 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 COQ7Q99807 217 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 CDADC1Q9BWV3 514 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 TXLNGYQ9BZA5 131 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 UTS2RQ9UKP6 389 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 PLAGL1Q9UM63 463 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 CPSF4LA6NMK7 179 aaKnown RBP13.59□□□□□ -0.23
CDH3-201ENST00000264012 TNFP01375 233 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 ACRV1P26436 265 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 GMPRP36959 345 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 CDKN2DP55273 166 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 BTN3A2P78410 334 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 RAB33AQ14088 237 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 EOGTQ5NDL2 527 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 KRT77Q7Z794 578 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 NPAS3Q8IXF0 933 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 GEMIN6Q8WXD5 167 aaKnown RBP13.59□□□□□ -0.23
CDH3-201ENST00000264012 BIRC7Q96CA5 298 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 SGIP1Q9BQI5 828 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 IL12BP29460 328 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 GALK1P51570 392 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 MTTPP55157 894 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 RAB8AP61006 207 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 PTGES3Q15185 160 aaKnown RBP13.59□□□□□ -0.23
CDH3-201ENST00000264012 UNC50Q53HI1 259 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 ANO7Q6IWH7 933 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 USP30Q70CQ3 517 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 ARFGAP1Q8N6T3 406 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 FAR1Q8WVX9 515 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 TUBA8Q9NY65 449 aaPredicted RBP13.59□□□□□ -0.23
CDH3-201ENST00000264012 TRBC2A0A5B9 178 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 LDB2O43679 373 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 CREG1O75629 220 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 BCHEP06276 602 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 CNPY1Q3B7I2 92 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 XKR4Q5GH76 650 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 IL23AQ9NPF7 189 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 PCDHB11Q9Y5F2 797 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 WWP2O00308 870 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 RFPL2O75678 378 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 PRKAR1AP10644 381 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 ALPPL2P10696 532 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 FMO3P31513 532 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 CD68P34810 354 aaPredicted RBP13.59□□□□□ -0.23
CDH3-201ENST00000264012 HMGCLP35914 325 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 CRB2Q5IJ48 1285 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 RANBP10Q6VN20 620 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 IKBIPQ70UQ0 350 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 ERMP1Q7Z2K6 904 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 PDPRQ8NCN5 879 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 ZFAND2BQ8WV99 257 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 PMEPA1Q969W9 287 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 PKP4Q99569 1192 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 CCDC106Q9BWC9 280 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 GSDMCQ9BYG8 508 aa13.59□□□□□ -0.23
CDH3-201ENST00000264012 KAT8Q9H7Z6 458 aaKnown RBP13.59□□□□□ -0.23
CDH3-201ENST00000264012 WDR6Q9NNW5 1121 aaKnown RBP13.59□□□□□ -0.23
CDH3-201ENST00000264012 ADH1BP00325 375 aa13.58□□□□□ -0.23
CDH3-201ENST00000264012 NPPAP01160 153 aa13.58□□□□□ -0.23
CDH3-201ENST00000264012 C9P02748 559 aa13.58□□□□□ -0.23
CDH3-201ENST00000264012 SLC8B1Q6J4K2 584 aa13.58□□□□□ -0.23
CDH3-201ENST00000264012 ZNF433Q8N7K0 673 aaPredicted RBP13.58□□□□□ -0.23
CDH3-201ENST00000264012 C3orf58Q8NDZ4 430 aa13.58□□□□□ -0.23
CDH3-201ENST00000264012 IFT27Q9BW83 186 aa13.58□□□□□ -0.23
CDH3-201ENST00000264012 OR51V1Q9H2C8 321 aa13.58□□□□□ -0.23
CDH3-201ENST00000264012 ZBTB42B2RXF5 422 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 FAM189A1O60320 539 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 PAK4O96013 591 aaPredicted RBP13.58□□□□□ -0.24
CDH3-201ENST00000264012 GIMD1P0DJR0 217 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 CHRM1P11229 460 aaPredicted RBP13.58□□□□□ -0.24
CDH3-201ENST00000264012 MAGP20916 626 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 BNC1Q01954 994 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 TOR1AIP1Q5JTV8 583 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 CEACAM20Q6UY09 585 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 KRT74Q7RTS7 529 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 TRAM1L1Q8N609 369 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 ARMC5Q96C12 935 aa13.58□□□□□ -0.24
CDH3-201ENST00000264012 NEUROD4Q9HD90 331 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms