RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 BROXQ5VW32 411 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 DOK6Q6PKX4 331 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 CFAP206Q8IYR0 622 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 ELMOD2Q8IZ81 293 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 TRAM1L1Q8N609 369 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 SETD9Q8NE22 299 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 UBE2E3Q969T4 207 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 ALG14Q96F25 216 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 CCM2Q9BSQ5 444 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 IL23AQ9NPF7 189 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 TLR9Q9NR96 1032 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 AHSPQ9NZD4 102 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 CORO2BQ9UQ03 480 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 RWDD3Q9Y3V2 267 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 LAMA3Q16787 3333 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 H3BNH8 94 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 FXYD1O00168 92 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 AP1G1O43747 822 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 NTRK1P04629 796 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 KCNC3Q14003 757 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 ZNF805Q5CZA5 627 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 CCNYL2Q5T2Q4 361 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 TMPRSS11BQ86T26 416 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 THOC6Q86W42 341 aaKnown RBP15.81■□□□□ 0.12
CTCF-201ENST00000264010 HIPK1Q86Z02 1210 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 ERI1Q8IV48 349 aaKnown RBP15.81■□□□□ 0.12
CTCF-201ENST00000264010 UBTD2Q8WUN7 234 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 MAGED4Q96JG8 741 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 ELOVL2Q9NXB9 296 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 TAPBPO15533 448 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 PRKD3O94806 890 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 CLIC3O95833 236 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 SERPINA1P01009 418 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 IL12AP29459 219 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 CHI3L1P36222 383 aaPredicted RBP15.81■□□□□ 0.12
CTCF-201ENST00000264010 CLDN8P56748 225 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 TOP3AQ13472 1001 aaPredicted RBP15.81■□□□□ 0.12
CTCF-201ENST00000264010 GRASPQ7Z6J2 395 aaPredicted RBP15.81■□□□□ 0.12
CTCF-201ENST00000264010 ZNF366Q8N895 744 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 TPD52L3Q96J77 140 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 ANKRD60Q9BZ19 345 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 KCNH6Q9H252 994 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 LINC00597Q9H2U6 94 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 PCDH10Q9P2E7 1040 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 INTS6Q9UL03 887 aaKnown RBP15.81■□□□□ 0.12
CTCF-201ENST00000264010 C1QTNF3-AMACRE9PGA6 284 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 TBX1O43435 398 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 NUAK1O60285 661 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 NFATC1O95644 943 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 ANXA4P09525 319 aaPredicted RBP15.81■□□□□ 0.12
CTCF-201ENST00000264010 AOAHP28039 575 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 PNLIPRP1P54315 467 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 ATG9BQ674R7 924 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 AGTRAPQ6RW13 159 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 ADCK2Q7Z695 626 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 THAP5Q7Z6K1 395 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 RBM23Q86U06 439 aaKnown RBP15.81■□□□□ 0.12
CTCF-201ENST00000264010 C11orf74Q86VG3 221 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 LRIG1Q96JA1 1093 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 SMOXQ9NWM0 555 aa15.81■□□□□ 0.12
CTCF-201ENST00000264010 C5orf58C9J3I9 102 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 OLFM2O95897 454 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 ADH5P11766 374 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 CLK3P49761 638 aaKnown RBP15.8■□□□□ 0.12
CTCF-201ENST00000264010 ABHD18Q0P651 414 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 CBX2Q14781 532 aaPredicted RBP15.8■□□□□ 0.12
CTCF-201ENST00000264010 OR4F3Q6IEY1 312 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 CYHR1Q6ZMK1 362 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 TMEM150AQ86TG1 271 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 SORCS1Q8WY21 1168 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 C12orf43Q96C57 262 aaKnown RBP15.8■□□□□ 0.12
CTCF-201ENST00000264010 LYSMD1Q96S90 227 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 YTHDF1Q9BYJ9 559 aaKnown RBP15.8■□□□□ 0.12
CTCF-201ENST00000264010 RIBC2Q9H4K1 309 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 A0A096LPI6 279 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 TTC34A8MYJ7 566 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 PRR35P0CG20 571 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 GGT1P19440 569 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 HTRA3P83110 453 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 GK3PQ14409 553 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 ARTNQ5T4W7 220 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 MED27Q6P2C8 311 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 CHERPQ8IWX8 916 aaKnown RBP15.8■□□□□ 0.12
CTCF-201ENST00000264010 MFSD2AQ8NA29 543 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 TCEAL4Q96EI5 215 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 RPF2Q9H7B2 306 aaKnown RBP15.8■□□□□ 0.12
CTCF-201ENST00000264010 REEP1Q9H902 201 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 MIEF1Q9NQG6 463 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 TRBV5-4A0A0C4DH59 114 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 CREG1O75629 220 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 RPL3P39023 403 aaKnown RBP15.8■□□□□ 0.12
CTCF-201ENST00000264010 PTSQ03393 145 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 ANKDD1AQ495B1 522 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 SPDYE7PQ495Y7 208 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 SZRD1Q7Z422 152 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 DTWD1Q8N5C7 304 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 BEND7Q8N7W2 519 aaPredicted RBP15.8■□□□□ 0.12
CTCF-201ENST00000264010 SPPL2AQ8TCT8 520 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 GLYATL1Q969I3 302 aa15.8■□□□□ 0.12
CTCF-201ENST00000264010 SLCO4A1Q96BD0 722 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 260.4 ms