RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 HOXC6P09630 235 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 KHKP50053 298 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 NDST2P52849 883 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 XKR4Q5GH76 650 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 TMEM53Q6P2H8 277 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 CLEC20AQ6ZU45 233 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 KLHL6Q8WZ60 621 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.532e-7■■■■□ 25.6
SMG6-201ENST00000263073 CLCC1Q96S66 551 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 CENPMQ9NSP4 180 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 ZCCHC3Q9NUD5 404 aaKnown RBP11.75□□□□□ -0.53
SMG6-201ENST00000263073 CPQQ9Y646 472 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 SMIM35A0A1B0GVV1 85 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 L7N2F9 121 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 FBP2O00757 339 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 GRK6P43250 576 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 ARCN1P48444 511 aaKnown RBP11.75□□□□□ -0.53
SMG6-201ENST00000263073 IL10RBQ08334 325 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 LYSMD3Q7Z3D4 306 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 TIGD4Q8IY51 512 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 PROKR2Q8NFJ6 384 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 C12orf66Q96MD2 445 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 ALKBH4Q9NXW9 302 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 FETUBQ9UGM5 382 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.75□□□□□ -0.53
SMG6-201ENST00000263073 MANSC4A6NHS7 340 aaPredicted RBP11.75□□□□□ -0.53
SMG6-201ENST00000263073 M0QX08 132 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 SOCS2O14508 198 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 SLC22A2O15244 555 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 VNN2O95498 520 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 PRAMEF12O95522 483 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 FGF3P11487 239 aaPredicted RBP11.75□□□□□ -0.53
SMG6-201ENST00000263073 PPM1AP35813 382 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 MAP3K8P41279 467 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 FAM46CQ5VWP2 391 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 TMC8Q8IU68 726 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 CASTOR1Q8WTX7 329 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 NIFKQ9BYG3 293 aaKnown RBP11.75□□□□□ -0.53
SMG6-201ENST00000263073 PAQR5Q9NXK6 330 aaPredicted RBP11.75□□□□□ -0.53
SMG6-201ENST00000263073 PLEKHA6Q9Y2H5 1048 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 OR6C75A6NL08 312 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 ANXA8P13928 327 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 CMPK1P30085 196 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 GBX2P52951 348 aaPredicted RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 ZCCHC12Q6PEW1 402 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 MSANTD1Q6ZTZ1 278 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 GALNT13Q8IUC8 556 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 GLB1L3Q8NCI6 653 aaPredicted RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 LCN9Q8WX39 176 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 TIFAQ96CG3 184 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 PHOX2BQ99453 314 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 MIPEPQ99797 713 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 C1orf21Q9H246 121 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 ACTR3BQ9P1U1 418 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 VPS29Q9UBQ0 182 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 GPR89AB7ZAQ6 455 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 KHNYNO15037 678 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 INPPL1O15357 1258 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 REM1O75628 298 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 GPR89BP0CG08 455 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 ZNF823P16415 610 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 IDSP22304 550 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 UQCRC1P31930 480 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 PSMA6P60900 246 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 FKBP1AP62942 108 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 LIPKQ5VXJ0 399 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 QSOX2Q6ZRP7 698 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 KRTCAP2Q8N6L1 136 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 LRRC15Q8TF66 581 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 RBM18Q96H35 190 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 GSKIPQ9P0R6 139 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 MRPS33Q9Y291 106 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 ADH1AP07327 375 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 C8GP07360 202 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 OR3A3P47888 321 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 OR3A2P47893 321 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 MEF2AQ02078 507 aaPredicted RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 HNRNPDQ14103 355 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 ALG1LQ6GMV1 187 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 CDHR3Q6ZTQ4 885 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 OR6C4Q8NGE1 309 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 ENAMQ9NRM1 1142 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 FAM53CQ9NYF3 392 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 CRISP3P54108 245 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 TUBA4AP68366 448 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 GRB7Q14451 532 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 DLK2Q6UY11 383 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 SPAG16Q8N0X2 631 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 TCEANCQ8N8B7 351 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 YIPF7Q8N8F6 280 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 ENDOVQ8N8Q3 282 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 ADAD1Q96M93 576 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 NUDT15Q9NV35 164 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 A0A1B0GVM2 712 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 GLOD5A6NK44 160 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 PDCD5O14737 125 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 IL12BP29460 328 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 AP1S2P56377 157 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 CHRNA6Q15825 494 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 AMIGO1Q86WK6 493 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms