RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SERPINA7P05543 415 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 ENO3P13929 434 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 EZRP15311 586 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 GRK3P35626 688 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 GCGRP47871 477 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 RGS4P49798 205 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 EMP3P54852 163 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 ADARP55265 1226 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 PRDX1Q06830 199 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 SIX1Q15475 284 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 HKDC1Q2TB90 917 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 FBXO42Q6P3S6 717 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 UBE2R2Q712K3 238 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 PAQR7Q86WK9 346 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 CILP2Q8IUL8 1156 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 REXO1L1PQ8IX06 675 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 CATSPER1Q8NEC5 780 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 BRIX1Q8TDN6 353 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 C10orf90Q96M02 699 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 RUBCNLQ9H714 662 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 XAB2Q9HCS7 855 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 CCDC177Q9NQR7 707 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 PLA2G3Q9NZ20 509 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 ABI3Q9P2A4 366 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 SUCOQ9UBS9 1254 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 TRMT6Q9UJA5 497 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 NTNG1Q9Y2I2 539 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 KLK4Q9Y5K2 254 aa11.65□□□□□ -0.54
TRAF4-202ENST00000262396 SPTAN1Q13813 2472 aaKnown RBP11.65□□□□□ -0.54
TRAF4-202ENST00000262396 ICE1Q9Y2F5 2266 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 GOLGA6L10A0A0M3HER8 536 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 TCRBV7S3A2A0A539 114 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 ENO4A6NNW6 628 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 KLHL18O94889 574 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 BMP10O95393 424 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 CLDN1O95832 211 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 SLC16A8O95907 504 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 HIST1H2AGP0C0S8 130 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-202ENST00000262396 PRR35P0CG20 571 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 MPC1LP0DKB6 136 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 C8orf89P0DMQ9 161 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 HIST1H2ADP20671 130 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 ARNTP27540 789 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 CASP6P55212 293 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 RBPJQ06330 500 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 CTBP1Q13363 440 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 KCNJ11Q14654 390 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 PRTGQ2VWP7 1150 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 ARMC3Q5W041 872 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 IGFL2Q6UWQ7 119 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 GFRALQ6UXV0 394 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 NEK10Q6ZWH5 1172 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 LAPTM4BQ86VI4 370 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 FJX1Q86VR8 437 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 PLD3Q8IV08 490 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 PRELID2Q8N945 189 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 GRK7Q8WTQ7 553 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 HIST1H2AHQ96KK5 128 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 HIST1H2AJQ99878 128 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 FAM167BQ9BTA0 163 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 H2AFJQ9BTM1 129 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 COMMD10Q9Y6G5 202 aa11.64□□□□□ -0.55
TRAF4-202ENST00000262396 USP9XQ93008 2570 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-202ENST00000262396 TRGV8A0A0C4DH27 118 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 FAM237BA0A1B0GVD1 139 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 H7BY64 318 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 HAT1O14929 419 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 KIF5CO60282 957 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 RASAL1O95294 804 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 CRYABP02511 175 aaKnown RBP11.63□□□□□ -0.55
TRAF4-202ENST00000262396 STATHP02808 62 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 COX6A1P12074 109 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 MLNP12872 115 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 HRH2P25021 359 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 DCTP40126 519 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 YBX1P67809 324 aaKnown RBP11.63□□□□□ -0.55
TRAF4-202ENST00000262396 MAT1AQ00266 395 aaKnown RBP11.63□□□□□ -0.55
TRAF4-202ENST00000262396 ZNF33BQ06732 778 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 ACTN3Q08043 901 aaPredicted RBP11.63□□□□□ -0.55
TRAF4-202ENST00000262396 Q0VFX4 171 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 PTK6Q13882 451 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 PPP1R7Q15435 360 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 KCTD19Q17RG1 926 aaPredicted RBP11.63□□□□□ -0.55
TRAF4-202ENST00000262396 ATG9BQ674R7 924 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 LRRC8EQ6NSJ5 796 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 RIPOR1Q6ZS17 1223 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 CENPUQ71F23 418 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 C17orf64Q86WR6 236 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 DENND6AQ8IWF6 608 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 LMNTD2Q8IXW0 634 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 CPNE9Q8IYJ1 553 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 MYO1HQ8N1T3 1032 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 TBC1D19Q8N5T2 526 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 CAMKVQ8NCB2 501 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 ZNF480Q8WV37 535 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 KCNJ9Q92806 393 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 PRAP1Q96NZ9 151 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 GPR21Q99679 349 aa11.63□□□□□ -0.55
TRAF4-202ENST00000262396 TUBB6Q9BUF5 446 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms