RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 RIMKLBQ9ULI2 386 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 VSTM5A8MXK1 200 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 KHNYNO15037 678 aaKnown RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 CD6P30203 668 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 CTSKP43235 329 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 ENPP2Q13822 863 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 C9JVG2 144 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 GFRA2O00451 464 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 MAGEB3O15480 346 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 OR1I1O60431 355 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 TCTE1Q5JU00 501 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 COLEC12Q5KU26 742 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 OR1A2Q9Y585 309 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 URB1O60287 2271 aaKnown RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 FAM155AB1AL88 458 aaPredicted RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 TP53I11O14683 189 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 CER1O95813 267 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 CXCR1P25024 350 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 RAB28P51157 221 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 DSTNP60981 165 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 RPS15AP62244 130 aaKnown RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 ACY1Q03154 408 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 GRM7Q14831 915 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 NAIF1Q69YI7 327 aaPredicted RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 ZNF540Q8NDQ6 660 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 OR4K14Q8NGD5 310 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 LPGAT1Q92604 370 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 GFM1Q96RP9 751 aaKnown RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 DUSP23Q9BVJ7 150 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 RNF38Q9H0F5 515 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 METTL7AQ9H8H3 244 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 LDOC1O95751 146 aaPredicted RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 NR2C1P13056 603 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 RNH1P13489 461 aaKnown RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 TCEA1P23193 301 aaKnown RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 SPPL2CQ8IUH8 684 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 CHCHD4Q8N4Q1 142 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 RHEBL1Q8TAI7 183 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 SLC35A5Q9BS91 424 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 APOOQ9BUR5 198 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 OR8D2Q9GZM6 311 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 FAM120CQ9NX05 1096 aaKnown RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 PDP1Q9P0J1 537 aaPredicted RBP13.51□□□□□ -0.25
CDH1-201ENST00000261769 EPHA6Q9UF33 1036 aa13.51□□□□□ -0.25
CDH1-201ENST00000261769 PNMA8CA0A1B0GUJ8 204 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 GPR89AB7ZAQ6 455 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 BHMG1C9JSJ3 638 aaPredicted RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 GPR89BP0CG08 455 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 CSNK1DP48730 415 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 MLF2Q15773 248 aaPredicted RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 SNAPC1Q16533 368 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 TANGO2Q6ICL3 276 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 TMEM135Q86UB9 458 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 NAT6Q93015 286 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 PTCHD1Q96NR3 888 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 ZNF347Q96SE7 839 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 EPYCQ99645 322 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 IKZF2Q9UKS7 526 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 U3KQV3 271 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 FOXO6A8MYZ6 492 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 CXCR6O00574 342 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 UGT2B11O75310 529 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 NME6O75414 186 aaPredicted RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 MED26O95402 600 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 PROS1P07225 676 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 FBLP22087 321 aaKnown RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 PXNP49023 591 aaPredicted RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 TRIM71Q2Q1W2 868 aaKnown RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 MYRFLQ96LU7 910 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 DPH7Q9BTV6 452 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 PHF7Q9BWX1 381 aaPredicted RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 HCN2Q9UL51 889 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 OARD1Q9Y530 152 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 ENTPD2Q9Y5L3 495 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 S1PR4O95977 384 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 BCL10O95999 233 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 HSD3B1P14060 373 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 CD72P21854 359 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 HSD3B2P26439 372 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 CCR10P46092 362 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 CASP9P55211 416 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 Q6ZSR6 202 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 DPPA4Q7L190 304 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 RELL1Q8IUW5 271 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 ADAMTS18Q8TE60 1221 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 DAZLQ92904 295 aaKnown RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 HSPA12BQ96MM6 686 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 RTP3Q9BQQ7 232 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 GPATCH1Q9BRR8 931 aaKnown RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 DEFB126Q9BYW3 111 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 AKTIPQ9H8T0 292 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 A6NCN8 305 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 ABLIM3O94929 683 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 ZNF763Q0D2J5 394 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 BROXQ5VW32 411 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 ZCCHC12Q6PEW1 402 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 CYS1Q717R9 158 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 BNIPLQ7Z465 357 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms