RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZBTB20Q9HC78 741 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 C20orf96Q9NUD7 363 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC39A10Q9ULF5 831 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC22A14Q9Y267 594 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MRPS23Q9Y3D9 190 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CSAG2Q9Y5P2 127 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 A0A1W2PR48 441 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 LNP1A1A4G5 178 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 HAT1O14929 419 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 KLF4O43474 513 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 OR4F21O95013 312 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 RHOCP08134 193 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 G6PDP11413 515 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 NPY2RP49146 381 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 OR4D2P58180 307 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 KIAA0408Q6ZU52 694 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MYLK4Q86YV6 388 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 ARHGAP18Q8N392 663 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 DEFB119Q8N690 84 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF513Q8N8E2 541 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 OR7G3Q8NG95 312 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MGARPQ8TDB4 240 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 N4BP2L2Q92802 583 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 G6PC3Q9BUM1 346 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 NPHS2Q9NP85 383 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 C1GALT1Q9NS00 363 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 RLIMQ9NVW2 624 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 PCDHB1Q9Y5F3 818 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TMEM265A0A087WTH1 108 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 EXOC1LA0A1B0GW35 172 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 OR2A25A4D2G3 310 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 OIP5O43482 229 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 ZFXP17010 805 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CD1CP29017 333 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MAGEA2P43356 314 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 ALDH1A3P47895 512 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MXRA7P84157 204 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 KRT81Q14533 505 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 KRT71Q3SY84 523 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 GK5Q6ZS86 529 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SNX20Q7Z614 316 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CAMKMTQ7Z624 323 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CLECL1Q8IZS7 167 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CIDECQ96AQ7 238 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TMEM120AQ9BXJ8 343 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MRPL1Q9BYD6 325 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 XKR8Q9H6D3 395 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 VPS28Q9UK41 221 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 HEMK1Q9Y5R4 338 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 FAM86C2PA6NEL3 165 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 GABRR3A8MPY1 467 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 TROVE2P10155 538 aaKnown RBP eCLIP5.37□□□□□ -1.552e-22■■■■■ 136.3
TOPBP1-201ENST00000260810 AMD1P17707 334 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 IDSP22304 550 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ELF1P32519 619 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 HSPA7P48741 367 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CREMQ03060 361 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 MYBPC3Q14896 1274 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 C6orf132Q5T0Z8 1188 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF548Q8NEK5 533 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 TSACCQ96A04 125 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PHF12Q96QT6 1004 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ZDHHC6Q9H6R6 413 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 KLHL14Q9P2G3 628 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CAPN7Q9Y6W3 813 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 FAM227AF5H4B4 570 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CASQ2O14958 399 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 WNT11O96014 354 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 MYL2P10916 166 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 RORAP35398 523 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 TNFRSF4P43489 277 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CPA2P48052 419 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ABCE1P61221 599 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 DOC2AQ14183 400 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 INPP5JQ15735 1006 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PROX2Q3B8N5 592 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CEP68Q76N32 757 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ENDOVQ8N8Q3 282 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PAPD5Q8NDF8 572 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PSMF1Q92530 271 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 COQ8BQ96D53 544 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CHMP6Q96FZ7 201 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 NUF2Q9BZD4 464 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 BTRCQ9Y297 605 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 FFAR2O15552 330 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 FZD7O75084 574 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 IGFBP1P08833 259 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PVRP15151 417 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 TEAD1P28347 426 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CSHL1Q14406 222 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 CHI3L2Q15782 390 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 SYT16Q17RD7 645 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PTCRAQ6ISU1 281 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 NPSR1Q6W5P4 371 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 C16orf47Q6ZP98 133 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 USP51Q70EK9 711 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 GLT6D1Q7Z4J2 308 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 ATP11CQ8NB49 1132 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 STMN2Q93045 179 aa5.37□□□□□ -1.55
TOPBP1-201ENST00000260810 PPP1R36Q96LQ0 422 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms