RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 REPS1Q96D71 796 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 TMEM168Q9H0V1 697 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 STX18Q9P2W9 335 aaKnown RBP21.55■■□□□ 1.04
SIX3-201ENST00000260653 ABCD2Q9UBJ2 740 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 MRPS17Q9Y2R5 130 aaKnown RBP21.55■■□□□ 1.04
SIX3-201ENST00000260653 FAM170BA6NMN3 283 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 MAPK1P28482 360 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 RPE65Q16518 533 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 SAMD4BQ5PRF9 694 aaKnown RBP21.55■■□□□ 1.04
SIX3-201ENST00000260653 SLC15A3Q8IY34 581 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 LAS2Q8IYD9 372 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 DNAJB14Q8TBM8 379 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 FCRL1Q96LA6 429 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 PCDHAC1Q9H158 963 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 CXorf56Q9H5V9 222 aa21.55■■□□□ 1.04
SIX3-201ENST00000260653 CUEDC1Q9NWM3 386 aaPredicted RBP21.55■■□□□ 1.04
SIX3-201ENST00000260653 ACOT8O14734 319 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 YPEL5P62699 121 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 PLIN5Q00G26 463 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 ALG11Q2TAA5 492 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 C17orf64Q86WR6 236 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 KIAA2013Q8IYS2 634 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 SLC22A18ASQ8N1D0 253 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 GLB1L3Q8NCI6 653 aaPredicted RBP21.54■■□□□ 1.04
SIX3-201ENST00000260653 CMTM6Q9NX76 183 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 SUCOQ9UBS9 1254 aaKnown RBP21.54■■□□□ 1.04
SIX3-201ENST00000260653 HS3ST3A1Q9Y663 406 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 PRAMEF26H0Y7S4 382 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 RASGRP1O95267 797 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 ACPPP15309 386 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 CD6P30203 668 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 CCR5P51681 352 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 CLDN8P56748 225 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 SRP54P61011 504 aaKnown RBP21.54■■□□□ 1.04
SIX3-201ENST00000260653 ACSM2AQ08AH3 577 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 ACSM2BQ68CK6 577 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 PRMT9Q6P2P2 845 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 FAM129CQ86XR2 697 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 DPP10Q8N608 796 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 OR52E1Q8NGJ3 308 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 SLC13A3Q8WWT9 602 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 ASB9Q96DX5 294 aa21.54■■□□□ 1.04
SIX3-201ENST00000260653 C11orf24Q96F05 449 aaPredicted RBP21.54■■□□□ 1.04
SIX3-201ENST00000260653 VCANP13611 3396 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 HEATR5BQ9P2D3 2071 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 LRP4O75096 1905 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 ZNF839A8K0R7 811 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 MTHFD1P11586 935 aaKnown RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 RAB28P51157 221 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 FOXM1Q08050 763 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 HIST2H2ACQ16777 129 aaPredicted RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 RABL3Q5HYI8 236 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 HIST2H2AA3Q6FI13 130 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 SLC30A9Q6PML9 568 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 ABI3BPQ7Z7G0 1075 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 DHDDSQ86SQ9 333 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 SIX5Q8N196 739 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 BHLHE22Q8NFJ8 381 aaPredicted RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 GFM2Q969S9 779 aaKnown RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 S100A14Q9HCY8 104 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 WNT16Q9UBV4 365 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 ARHGEF17Q96PE2 2063 aaPredicted RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 TNFRSF10CO14798 259 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 FKBP6O75344 327 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 BCAS2O75934 225 aaPredicted RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 LRATO95237 230 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 PGRP06401 933 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 PXNP49023 591 aaPredicted RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 STARD6P59095 220 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 AP2B1P63010 937 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 TRIM25Q14258 630 aaKnown RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 HID1Q8IV36 788 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 RAB42Q8N4Z0 105 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 C1orf52Q8N6N3 182 aaKnown RBP21.53■■□□□ 1.04
SIX3-201ENST00000260653 GPR156Q8NFN8 814 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 MVB12BQ9H7P6 319 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 DMRT3Q9NQL9 472 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 PCDHA9Q9Y5H5 950 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 SLCO1B1Q9Y6L6 691 aa21.53■■□□□ 1.04
SIX3-201ENST00000260653 PKLRP30613 574 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 ACTR1BP42025 376 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 ACTR1AP61163 376 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 ZP2Q05996 745 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 LAPTM5Q13571 262 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 PUS10Q3MIT2 529 aaKnown RBP21.52■■□□□ 1.04
SIX3-201ENST00000260653 DLEU7Q6UYE1 221 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 ADHFE1Q8IWW8 467 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 TMEM125Q96AQ2 219 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 PPT2Q9UMR5 302 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 ICKQ9UPZ9 632 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 RUVBL1Q9Y265 456 aaKnown RBP21.52■■□□□ 1.04
SIX3-201ENST00000260653 FANCMQ8IYD8 2048 aa21.52■■□□□ 1.04
SIX3-201ENST00000260653 IL6P05231 212 aa21.52■■□□□ 1.03
SIX3-201ENST00000260653 PTDSS1P48651 473 aaKnown RBP21.52■■□□□ 1.03
SIX3-201ENST00000260653 SLC34A1Q06495 639 aa21.52■■□□□ 1.03
SIX3-201ENST00000260653 C6orf10Q5SRN2 563 aa21.52■■□□□ 1.03
SIX3-201ENST00000260653 TMIGD1Q6UXZ0 262 aa21.52■■□□□ 1.03
SIX3-201ENST00000260653 SNX19Q92543 992 aa21.52■■□□□ 1.03
SIX3-201ENST00000260653 GOLGA4Q13439 2230 aaKnown RBP21.51■■□□□ 1.03
SIX3-201ENST00000260653 FOXE1O00358 373 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms