RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CLP1Q92989 425 aaKnown RBP17.88■□□□□ 0.45
LRP3-201ENST00000253193 PRDM8Q9NQV8 689 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 VNN3Q9NY84 501 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 VIPP01282 170 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 GRSF1Q12849 480 aaKnown RBP eCLIP17.88■□□□□ 0.45
LRP3-201ENST00000253193 SLC14A1Q13336 389 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 DPY19L1Q2PZI1 675 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 ZNF691Q5VV52 312 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 CPZQ66K79 652 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 ZNF783Q6ZMS7 281 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 OR4K1Q8NGD4 311 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 MCFD2Q8NI22 146 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 ZNF334Q9HCZ1 680 aaPredicted RBP17.88■□□□□ 0.45
LRP3-201ENST00000253193 DLGAP3O95886 979 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 C1QCP02747 245 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 SRSF11Q05519 484 aaKnown RBP17.88■□□□□ 0.45
LRP3-201ENST00000253193 INSL5Q9Y5Q6 135 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 NUDT7P0C024 238 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 FPR1P21462 350 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 RRM2P31350 389 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 POLR2LP62875 67 aaKnown RBP17.87■□□□□ 0.45
LRP3-201ENST00000253193 VLDLRP98155 873 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 SPIBQ01892 262 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 Q6ZPB1 254 aaPredicted RBP17.87■□□□□ 0.45
LRP3-201ENST00000253193 ZSWIM9Q86XI8 627 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 TCAIMQ8N3R3 496 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 ZFP90Q8TF47 636 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 HTRA1Q92743 480 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 ATAD3AQ9NVI7 634 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 SOBPA7XYQ1 873 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 CATP04040 527 aaKnown RBP17.87■□□□□ 0.45
LRP3-201ENST00000253193 EPHA2P29317 976 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 SERPINB1P30740 379 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 RPP38P78345 283 aaKnown RBP17.87■□□□□ 0.45
LRP3-201ENST00000253193 IFITM3Q01628 133 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 ACOX1Q15067 660 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 B3GNT8Q7Z7M8 397 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 SLC35B4Q969S0 331 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 ZNF347Q96SE7 839 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 WDR12Q9GZL7 423 aaKnown RBP17.87■□□□□ 0.45
LRP3-201ENST00000253193 RERGLQ9H628 205 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 TM9SF3Q9HD45 589 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 CCL27Q9Y4X3 112 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 SOCS5O75159 536 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 LCKP06239 509 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 CDH12P55289 794 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 KIAA0040Q15053 153 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 GTF2IRD2BQ6EKJ0 949 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 NIPAL1Q6NVV3 410 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 SHQ1Q6PI26 577 aaKnown RBP17.87■□□□□ 0.45
LRP3-201ENST00000253193 GTF2IRD2Q86UP8 949 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 LMNTD1Q8N9Z9 388 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 CHST14Q8NCH0 376 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 DNAJB8Q8NHS0 232 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 RPL3LQ92901 407 aaKnown RBP17.87■□□□□ 0.45
LRP3-201ENST00000253193 SCRN2Q96FV2 425 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 SH3YL1Q96HL8 342 aaPredicted RBP17.87■□□□□ 0.45
LRP3-201ENST00000253193 COPS4Q9BT78 406 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 ACAT2Q9BWD1 397 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 ALOXE3Q9BYJ1 711 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 SPG21Q9NZD8 308 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 ENPP5Q9UJA9 477 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 MAP4K5Q9Y4K4 846 aa17.87■□□□□ 0.45
LRP3-201ENST00000253193 TNFRSF11BO00300 401 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 S100A5P33763 92 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 DAPP51397 102 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.86■□□□□ 0.45
LRP3-201ENST00000253193 THOC6Q86W42 341 aaKnown RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 RAVER1Q8IY67 606 aaKnown RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 OR5AK3PQ8NH89 298 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 HPS1Q92902 700 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 EPS8L2Q9H6S3 715 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 GPN2Q9H9Y4 310 aaPredicted RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 INTS6Q9UL03 887 aaKnown RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 DUSP12Q9UNI6 340 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 TRAV19A0A0A6YYK7 116 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 GAPDHSO14556 408 aaPredicted RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 CCDC159P0C7I6 412 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 BDKRB1P46663 353 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 CLCA4Q14CN2 919 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 TPGS2Q68CL5 300 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 TRAF7Q6Q0C0 670 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 CEP19Q96LK0 163 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 CEP295NLQ96MC4 621 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 TCF25Q9BQ70 676 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 MAGIXQ9H6Y5 334 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 AREL1O15033 823 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 POP4O95707 220 aaKnown RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 CBSLP0DN79 551 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 CBSP35520 551 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 HPCAL1P37235 193 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 C22orf39Q6P5X5 142 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 TRMT11Q7Z4G4 463 aaKnown RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 DSG4Q86SJ6 1040 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 ZNF605Q86T29 641 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 USP7Q93009 1102 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 RIOK2Q9BVS4 552 aaKnown RBP17.86■□□□□ 0.45
LRP3-201ENST00000253193 SLC12A9Q9BXP2 914 aa17.86■□□□□ 0.45
LRP3-201ENST00000253193 EFCAB9A8MZ26 197 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms