RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CPTPQ5TA50 214 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 FAM183BPQ6ZVS7 135 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 PLA2G15Q8NCC3 412 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 C12orf65Q9H3J6 166 aaKnown RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 ADAM28Q9UKQ2 775 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 ACSL5Q9ULC5 683 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 PCDHGA8Q9Y5G5 932 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 URB1O60287 2271 aaKnown RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 GRXCR1A8MXD5 290 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 M0R129 80 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 RHBDF2Q6PJF5 856 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 DPY19L4Q7Z388 723 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 PRR18Q8N4B5 295 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 ZNF709Q8N972 641 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 LENG8Q96PV6 779 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 GPATCH2Q9NW75 528 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 SNX10Q9Y5X0 201 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 NCANO14594 1321 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TEX13DA0A0J9YY54 714 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 INPPL1O15357 1258 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 BPGMP07738 259 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 SFTPBP07988 381 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 GLDCP23378 1020 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 DNASE1P24855 282 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 ALDH3B2P48448 385 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 DSG2Q14126 1118 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 POP5Q969H6 163 aaKnown RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 RPS10P5Q9NQ39 176 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 ZNF282Q9UDV7 671 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 CBY1Q9Y3M2 126 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TRBC1P01850 177 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 GPIP06744 558 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 IL32P24001 234 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 RORAP35398 523 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 HTRA4P83105 476 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 ALX1Q15699 326 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TMEM236Q5W0B7 351 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 LDB1Q86U70 411 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 PDZD9Q8IXQ8 264 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 KCNC2Q96PR1 638 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TP63Q9H3D4 680 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 GFOD1Q9NXC2 390 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TTC24A2A3L6 582 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 APOC4-APOC2K7ER74 178 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TLX3O43711 291 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 APOC2P02655 101 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TMEM35AQ53FP2 167 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 INTS5Q6P9B9 1019 aaKnown RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 PRICKLE2Q7Z3G6 844 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TRABD2AQ86V40 505 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 ZDHHC21Q8IVQ6 265 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 SVOPLQ8N434 492 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 ACMSDQ8TDX5 336 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 HSPA12AO43301 675 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 CTDNEP1O95476 244 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 OR12D2P58182 307 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 ASTE1Q2TB18 679 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 ZNF792Q3KQV3 632 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 KIAA1161Q6NSJ0 714 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 ZSCAN4Q8NAM6 433 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 SCGB1C1Q8TD33 95 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 C14orf166Q9Y224 244 aaKnown RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 POMPQ9Y244 141 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 LRRIQ1Q96JM4 1722 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 KIAA1210Q9ULL0 1709 aa10.83□□□□□ -0.67
MSH6-201ENST00000234420 E9PI62 339 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 INMT-MINDY4F8WBC2 141 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 FGF19O95750 216 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 PPIBP23284 216 aaKnown RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 BLKP51451 505 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 CLCNKBP51801 687 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 GRB10Q13322 594 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 SLC1A5Q15758 541 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ZNF410Q86VK4 478 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 OR10A6Q8NH74 314 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 GPR151Q8TDV0 419 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ART4Q93070 314 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 HDAC10Q969S8 669 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 MYO19Q96H55 970 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 C3orf14Q9HBI5 128 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 A0A0U1RQK1 487 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 HACD1B0YJ81 288 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 B3GALT2O43825 422 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 FOXD2O60548 495 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 MAP3K8P41279 467 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 PXNP49023 591 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 RPS3AP61247 264 aaKnown RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 RUNX2Q13950 521 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 MAD2L1BPQ15013 274 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 IQCCQ4KMZ1 466 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 KLHL22Q53GT1 634 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 DCLRE1AQ6PJP8 1040 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 TMEM220Q6QAJ8 160 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 TMPPEQ6ZT21 453 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 DPPA2Q7Z7J5 298 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 STON2Q8WXE9 905 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 UBE2E3Q969T4 207 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 MALSU1Q96EH3 234 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 UROC1Q96N76 676 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms