RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 SIM2Q14190 667 aaPredicted RBP15.46■□□□□ 0.07
SF3A2-201ENST00000221494 CARD16Q5EG05 197 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 CDKL4Q5MAI5 379 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 AGAP6Q5VW22 663 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 LAIR1Q6GTX8 287 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 SLC46A3Q7Z3Q1 461 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 HORMAD1Q86X24 394 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 PEX5LQ8IYB4 626 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 PHOSPHO2Q8TCD6 241 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 CHTF18Q8WVB6 975 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 RPRD1AQ96P16 312 aaPredicted RBP15.46■□□□□ 0.07
SF3A2-201ENST00000221494 AGAP4Q96P64 663 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 HHIPQ96QV1 700 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 EPYCQ99645 322 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 PCDH12Q9NPG4 1184 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 POLE4Q9NR33 117 aa15.46■□□□□ 0.07
SF3A2-201ENST00000221494 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.46■□□□□ 0.077e-7■□□□□ 9.3
SF3A2-201ENST00000221494 PLK4O00444 970 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 INSIG1O15503 277 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 TBX1O43435 398 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 MAN1A2O60476 641 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 WBP4O75554 376 aaKnown RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 KRT75O95678 551 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 CNPP09543 421 aaKnown RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 TRAPPC2P0DI81 140 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 TRAPPC2BP0DI82 140 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 CR2P20023 1033 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 FSHRP23945 695 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 PTPN6P29350 595 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 EFEMP1Q12805 493 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 COLEC12Q5KU26 742 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 RAP1GAP2Q684P5 730 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 PSAPL1Q6NUJ1 521 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 GALNT5Q7Z7M9 940 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 NAT16Q8N8M0 369 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 MDGA1Q8NFP4 955 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 HTRA1Q92743 480 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 ESAMQ96AP7 390 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 CRELD1Q96HD1 420 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 ADGRE3Q9BY15 652 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 FAM126AQ9BYI3 521 aaPredicted RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 KIF17Q9P2E2 1029 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 PSORS1C1Q9UIG5 152 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 SLCO3A1Q9UIG8 710 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 TRAPPC4Q9Y296 219 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 YIPF1Q9Y548 306 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 U3KQV3 271 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 MANBAO00462 879 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 PIRTP0C851 137 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 MSL3P1P0C860 447 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 PTX3P26022 381 aaPredicted RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 BMPR1AP36894 532 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 ACVRL1P37023 503 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 LIMK1P53667 647 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 RPS14P62263 151 aaKnown RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 CACNG1Q06432 222 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 NPRL3Q12980 569 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 INO80DQ53TQ3 878 aaPredicted RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 CEP68Q76N32 757 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 NANOGNBQ7Z5D8 188 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 HEATR4Q86WZ0 1026 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 PIANPQ8IYJ0 282 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 TCEAL8Q8IYN2 117 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 C9orf43Q8TAL5 461 aaPredicted RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 RASSF5Q8WWW0 418 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 RPL3LQ92901 407 aaKnown RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 CINPQ9BW66 212 aaPredicted RBP15.45■□□□□ 0.06
SF3A2-201ENST00000221494 CD244Q9BZW8 370 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 CCSER2Q9H7U1 834 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 REEP1Q9H902 201 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 RDH14Q9HBH5 336 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 ANGPTL3Q9Y5C1 460 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 PCDHGA3Q9Y5H0 932 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 KLK4Q9Y5K2 254 aa15.45■□□□□ 0.06
SF3A2-201ENST00000221494 PSMD11O00231 422 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 TLL1O43897 1013 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 TLR5O60602 858 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 KRT6AP02538 564 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 C9P02748 559 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 KRT6BP04259 564 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 LCKP06239 509 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 HOXD9P28356 352 aaPredicted RBP15.44■□□□□ 0.06
SF3A2-201ENST00000221494 KRT6CP48668 564 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 EIF4HQ15056 248 aaKnown RBP15.44■□□□□ 0.06
SF3A2-201ENST00000221494 TIMM50Q3ZCQ8 353 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 C10orf120Q5SQS8 335 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 DESI1Q6ICB0 168 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 EIF3MQ7L2H7 374 aaKnown RBP15.44■□□□□ 0.06
SF3A2-201ENST00000221494 P3H2Q8IVL5 708 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 METTL4Q8N3J2 472 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 PARP16Q8N5Y8 322 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 ANKK1Q8NFD2 765 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 COPS4Q9BT78 406 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 CDADC1Q9BWV3 514 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 PDP1Q9P0J1 537 aaPredicted RBP15.44■□□□□ 0.06
SF3A2-201ENST00000221494 MARCH2Q9P0N8 246 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 UBA2Q9UBT2 640 aaPredicted RBP15.44■□□□□ 0.06
SF3A2-201ENST00000221494 MAFFQ9ULX9 164 aa15.44■□□□□ 0.06
SF3A2-201ENST00000221494 NOX1Q9Y5S8 564 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms