RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 MUSKO15146 869 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 GP1BBP13224 206 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 ENGP17813 658 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF41P51814 821 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-201ENST00000219334 PACS2Q86VP3 889 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 OR6N1Q8NGY5 312 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 NODALQ96S42 347 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF717Q9BY31 904 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-201ENST00000219334 GRHL1Q9NZI5 618 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 SLC2A6Q9UGQ3 507 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 COL14A1Q05707 1796 aaKnown RBP18.43■□□□□ 0.54
SMPD3-201ENST00000219334 OR5K4A6NMS3 321 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 HEPACAM2A8MVW5 462 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 GBX2P52951 348 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-201ENST00000219334 JAG1P78504 1218 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 OR4F3Q6IEY1 312 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 TMEM214Q6NUQ4 689 aaKnown RBP18.43■□□□□ 0.54
SMPD3-201ENST00000219334 AJAP1Q9UKB5 411 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-201ENST00000219334 RPL36Q9Y3U8 105 aaKnown RBP18.43■□□□□ 0.54
SMPD3-201ENST00000219334 PCDHGA2Q9Y5H1 932 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 LOC730098B7Z3J9 87 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 TSPAN6O43657 245 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 MAP3K8P41279 467 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 GRIA2P42262 883 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 RPS6KA3P51812 740 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 CCDC80Q76M96 950 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 GPALPP1Q8IXQ4 340 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 GMLQ99445 158 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 GPR174Q9BXC1 333 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 ACTL8Q9H568 366 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 PHLPP1O60346 1717 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 LDB2O43679 373 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 AHSA1O95433 338 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 CFHP08603 1231 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 ADAM8P78325 824 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 KLF1Q13351 362 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-201ENST00000219334 SLC5A9Q2M3M2 681 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 C1orf216Q8TAB5 229 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 LRRC46Q96FV0 321 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 ASPNQ9BXN1 380 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 OR8D2Q9GZM6 311 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 TNFRSF10BO14763 440 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 GALK1P51570 392 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 PMM1Q92871 262 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 PLAGL1Q9UM63 463 aa18.43■□□□□ 0.54
SMPD3-201ENST00000219334 A0A1W2PP55 124 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 LINGO3P0C6S8 592 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 GSTM3P21266 225 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 TXNL4AP83876 142 aaKnown RBP18.42■□□□□ 0.54
SMPD3-201ENST00000219334 NANOGNBQ7Z5D8 188 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 OR10G2Q8NGC3 310 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 C1orf74Q96LT6 269 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 C16orf70Q9BSU1 422 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 RCBTB2O95199 551 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 STC1P52823 247 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 CBX3Q13185 183 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 C6orf52Q5T4I8 152 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 GPR153Q6NV75 609 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 CEP97Q8IW35 865 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 TNFAIP8L1Q8WVP5 186 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 CNDP2Q96KP4 475 aaKnown RBP18.42■□□□□ 0.54
SMPD3-201ENST00000219334 GAL3ST1Q99999 423 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF358Q9NW07 568 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 TAS2R7Q9NYW3 318 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 SLC17A6Q9P2U8 582 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 UPB1Q9UBR1 384 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 BCHEP06276 602 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 CHAF1BQ13112 559 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 RIN1Q13671 783 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 CRTC2Q53ET0 693 aaPredicted RBP18.42■□□□□ 0.54
SMPD3-201ENST00000219334 SLC39A5Q6ZMH5 540 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 OR52E4Q8NGH9 312 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 GEMIN6Q8WXD5 167 aaKnown RBP18.42■□□□□ 0.54
SMPD3-201ENST00000219334 PIK3R3Q92569 461 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 GPR62Q9BZJ7 368 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 SIX4Q9UIU6 781 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 MANBAO00462 879 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 FHP07954 510 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 PRPF38BQ5VTL8 546 aaKnown RBP18.42■□□□□ 0.54
SMPD3-201ENST00000219334 TXNRD3NBQ6F5E7 133 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 FRMD6Q96NE9 622 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 BRD7Q9NPI1 651 aa18.42■□□□□ 0.54
SMPD3-201ENST00000219334 KAT7O95251 611 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 GJB5O95377 273 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 EPOP01588 193 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 OR3A3P47888 321 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 OR3A2P47893 321 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 XKP51811 444 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 EEFSECP57772 596 aaKnown RBP18.41■□□□□ 0.54
SMPD3-201ENST00000219334 DERL2Q9GZP9 239 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 NKX2-4Q9H2Z4 354 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 OR51B5Q9H339 312 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 C8orf33Q9H7E9 229 aaPredicted RBP18.41■□□□□ 0.54
SMPD3-201ENST00000219334 A0A0D9SEW6 157 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 AIREO43918 545 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 AHSGP02765 367 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 SLC9A4Q6AI14 798 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 GOLGA7Q7Z5G4 137 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 PIM3Q86V86 326 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 ZC3HC1Q86WB0 502 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms