RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 NR4A1P22736 598 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 PCSK6P29122 969 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 CDKN2CP42773 168 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 GPR1P46091 355 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 SEC13P55735 322 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 LYPLAL1Q5VWZ2 237 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 C8orf82Q6P1X6 216 aaPredicted RBP9.66□□□□□ -0.86
USP11-201ENST00000218348 BRAT1Q6PJG6 821 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 DLEU7Q6UYE1 221 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 RBM44Q6ZP01 1051 aaKnown RBP9.66□□□□□ -0.86
USP11-201ENST00000218348 CHST15Q7LFX5 561 aaPredicted RBP9.66□□□□□ -0.86
USP11-201ENST00000218348 FAM47BQ8NA70 645 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 ADCY4Q8NFM4 1077 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 ASZ1Q8WWH4 475 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 FBXL20Q96IG2 436 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 PPP3R2Q96LZ3 170 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 CPEB1Q9BZB8 566 aaKnown RBP9.66□□□□□ -0.86
USP11-201ENST00000218348 SACM1LQ9NTJ5 587 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 C1orf109Q9NX04 203 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 SATB2Q9UPW6 733 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 DGKBQ9Y6T7 804 aa9.66□□□□□ -0.86
USP11-201ENST00000218348 TCF20Q9UGU0 1960 aaKnown RBP9.65□□□□□ -0.86
USP11-201ENST00000218348 FUOMA2VDF0 154 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 HEPACAM2A8MVW5 462 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 CYP2A7P20853 494 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 FASP25445 335 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 YAP1P46937 504 aaKnown RBP9.65□□□□□ -0.86
USP11-201ENST00000218348 CENPAP49450 140 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 PHC1P78364 1004 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 ENPP6Q6UWR7 440 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 TMPRSS11BQ86T26 416 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 HID1Q8IV36 788 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 ADGRG5Q8IZF4 528 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
USP11-201ENST00000218348 GLYATL1Q969I3 302 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 ISG20Q96AZ6 181 aaKnown RBP9.65□□□□□ -0.86
USP11-201ENST00000218348 ARRDC3Q96B67 414 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 NSMCE2Q96MF7 247 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 LYSMD1Q96S90 227 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 CHID1Q9BWS9 393 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 BRINP2Q9C0B6 783 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 TM7SF3Q9NS93 570 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 PCYT1BQ9Y5K3 369 aaPredicted RBP9.65□□□□□ -0.86
USP11-201ENST00000218348 TICRRQ7Z2Z1 1910 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 ARPC4-TTLL3A0A0A6YYG9 625 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 ARNTLO00327 626 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 WNT9AO14904 365 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 KCNH1O95259 989 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 KRT75O95678 551 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 CD22P20273 847 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 HRH2P25021 359 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 ATP1A4Q13733 1029 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 NFE2L1Q14494 772 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 TANGO2Q6ICL3 276 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 ERAP2Q6P179 960 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 METTL3Q86U44 580 aaKnown RBP9.65□□□□□ -0.86
USP11-201ENST00000218348 ZNF786Q8N393 782 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 DEFB123Q8N688 67 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 OR7G1Q8NGA0 311 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 KXD1Q9BQD3 176 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 Q9H521 79 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 DNAJC11Q9NVH1 559 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 ZIM2Q9NZV7 527 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 INVSQ9Y283 1065 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 CCL27Q9Y4X3 112 aa9.65□□□□□ -0.86
USP11-201ENST00000218348 TRPM6Q9BX84 2022 aa9.65□□□□□ -0.87
USP11-201ENST00000218348 AREL1O15033 823 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 DIRAS1O95057 198 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 PCDH8O95206 1070 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 PRKACGP22612 351 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 AQP1P29972 269 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 STT3AP46977 705 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 RPS14P62263 151 aaKnown RBP9.64□□□□□ -0.87
USP11-201ENST00000218348 TRAP1Q12931 704 aaKnown RBP9.64□□□□□ -0.87
USP11-201ENST00000218348 CATSPEREQ5SY80 951 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 AGTRAPQ6RW13 159 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 ZNF621Q6ZSS3 439 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 EPHX4Q8IUS5 362 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 NPAS3Q8IXF0 933 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 TRIML2Q8N7C3 387 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 PLA2G15Q8NCC3 412 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 GALNT6Q8NCL4 622 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 GANCQ8TET4 914 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 BTN2A2Q8WVV5 523 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 NEURL2Q9BR09 285 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 SLC12A9Q9BXP2 914 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 CARS2Q9HA77 564 aaKnown RBP9.64□□□□□ -0.87
USP11-201ENST00000218348 SLC25A37Q9NYZ2 338 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 ACTR3BQ9P1U1 418 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 ABCD2Q9UBJ2 740 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 ANAPC2Q9UJX6 822 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 ANKRD28O15084 1053 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 CLPTM1O96005 669 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 EBLN1P0CF75 366 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 S100A3P33764 101 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 DOC2AQ14183 400 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 ZNF234Q14588 700 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 CMPK2Q5EBM0 449 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 TBPL2Q6SJ96 375 aa9.64□□□□□ -0.87
USP11-201ENST00000218348 THOC6Q86W42 341 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms