RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 KRT33BQ14525 404 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 RPS6KA2Q15349 733 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 RBBP7Q16576 425 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 UGT3A2Q3SY77 523 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 C4orf46Q504U0 113 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 KIAA0895LQ68EN5 471 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 ZNF765Q7L2R6 523 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.22□□□□□ -0.77
CD4-201ENST00000011653 ZNF786Q8N393 782 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 MINDY1Q8N5J2 469 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 OR1E3Q8WZA6 343 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 HIST1H2AHQ96KK5 128 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 IL17FQ96PD4 163 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 HIST1H2AJQ99878 128 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 H2AFJQ9BTM1 129 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 HGH1Q9BTY7 390 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 C9orf16Q9BUW7 83 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 ACAT2Q9BWD1 397 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 TCEAL2Q9H3H9 227 aaPredicted RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 PTBP2Q9UKA9 531 aaKnown RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 ANGPTL3Q9Y5C1 460 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 hCG_2014768A0A024R1R8 64 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 PIP5K1BO14986 540 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 NUAK1O60285 661 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 KERAO60938 352 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 FGF4P08620 206 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 THEGLP0DJG4 465 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 HTR1BP28222 390 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 PI4KAP42356 2102 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 CDH15P55291 814 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 SH3BP2P78314 561 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 CSTF1Q05048 431 aaKnown RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 VPS26BQ4G0F5 336 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 LCN8Q6JVE9 175 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 SBSNQ6UWP8 590 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 ADAMTSL4Q6UY14 1074 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 NANOGNBQ7Z5D8 188 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 RBM12BQ8IXT5 1001 aaKnown RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 SLC45A3Q96JT2 553 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 KCNA7Q96RP8 456 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 ADI1Q9BV57 179 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 TMEM168Q9H0V1 697 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 TFB2MQ9H5Q4 396 aaKnown RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 ACTR3BQ9P1U1 418 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 MAP10Q9P2G4 905 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 PLXNB3Q9ULL4 1909 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 A0A0J9YVX5 310 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 RNF103-CHMP3A0A140T963 221 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 TPST1O60507 370 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 SDC3O75056 442 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 ZNF217O75362 1048 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 CRCPO75575 148 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 CEACAM5P06731 702 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 LBPP18428 481 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 CAPN3P20807 821 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 MYF6P23409 242 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 ACTR1BP42025 376 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 DHPSP49366 369 aaPredicted RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 ACTR1AP61163 376 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 TAGLNQ01995 201 aaKnown RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 ADAMTSL2Q86TH1 951 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 SPPL2CQ8IUH8 684 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 SFTPA2Q8IWL1 248 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 SLC15A3Q8IY34 581 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 TUBGCP3Q96CW5 907 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 FOPNLQ96NB1 174 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 PRDM8Q9NQV8 689 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 C8orf4Q9NR00 106 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 AGPAT4Q9NRZ5 378 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 EGFL7Q9UHF1 273 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 PNMA8BQ9ULN7 279 aaPredicted RBP10.22□□□□□ -0.77
CD4-201ENST00000011653 PDE10AQ9Y233 779 aa10.22□□□□□ -0.77
CD4-201ENST00000011653 A0A1B0GTL3 188 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 LAMTOR5O43504 91 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 SH3BGRLO75368 114 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 MATN4O95460 622 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 FCGR1AP12314 374 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 PRDX3P30048 256 aaKnown RBP10.21□□□□□ -0.77
CD4-201ENST00000011653 TRIM23P36406 574 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 CSNK1EP49674 416 aaKnown RBP10.21□□□□□ -0.77
CD4-201ENST00000011653 NUP107P57740 925 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 FOXM1Q08050 763 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 SIGLEC14Q08ET2 396 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 MYBPC3Q14896 1274 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 SPATS1Q496A3 300 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 USP39Q53GS9 565 aaKnown RBP10.21□□□□□ -0.77
CD4-201ENST00000011653 SGO1Q5FBB7 561 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 GCNT7Q6ZNI0 430 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 OR56A4Q8NGH8 313 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 OR5AR1Q8NGP9 310 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 FAM110BQ8TC76 370 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 COX14Q96I36 57 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 TEX101Q9BY14 249 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 TRIM54Q9BYV2 358 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 POPDC3Q9HBV1 291 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 DNAAF2Q9NVR5 837 aaKnown RBP10.21□□□□□ -0.77
CD4-201ENST00000011653 NFKBIL1Q9UBC1 381 aaPredicted RBP10.21□□□□□ -0.77
CD4-201ENST00000011653 TIMM22Q9Y584 194 aa10.21□□□□□ -0.77
CD4-201ENST00000011653 FAM86C2PA6NEL3 165 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms