RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PPM1MQ96MI6 270 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 SAMD11Q96NU1 681 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 FCRL5Q96RD9 977 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF416Q9BWM5 594 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 TAPBPLQ9BX59 468 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 PPIL3Q9H2H8 161 aaKnown RBP11.69□□□□□ -0.54
CAPN3-221ENST00000638141 TDRD3Q9H7E2 651 aaKnown RBP11.69□□□□□ -0.54
CAPN3-221ENST00000638141 MCCC2Q9HCC0 563 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 FANCFQ9NPI8 374 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 LYARQ9NX58 379 aaKnown RBP11.69□□□□□ -0.54
CAPN3-221ENST00000638141 VNN3Q9NY84 501 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 ACTL7AQ9Y615 435 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 FAM220BPB1ANY3 271 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 DFFAO00273 331 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 SLC7A4O43246 635 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ORC5O43913 435 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 DPM1O60762 260 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 WDR47O94967 919 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 OR4F21O95013 312 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 OR5F1O95221 314 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 CYP4B1P13584 511 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 CD9P21926 228 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 MAP2K6P52564 334 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 LAMTOR4Q0VGL1 99 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 STXBP2Q15833 593 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.68□□□□□ -0.54
CAPN3-221ENST00000638141 C10orf62Q5T681 223 aaPredicted RBP11.68□□□□□ -0.54
CAPN3-221ENST00000638141 OR4F3Q6IEY1 312 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 OR2T5Q6IEZ7 315 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ANKRD54Q6NXT1 300 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 FAHD1Q6P587 224 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 LIPIQ6XZB0 460 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ZSWIM9Q86XI8 627 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 CPXCR1Q8N123 301 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 CHCHD4Q8N4Q1 142 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 OR2T29Q8NH02 315 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 GGHQ92820 318 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 RADILQ96JH8 1075 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 MSLNLQ96KJ4 702 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF599Q96NL3 588 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 NECTIN4Q96NY8 510 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 RACGAP1Q9H0H5 632 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 PCDHB16Q9NRJ7 776 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 MCUBQ9NWR8 336 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 MIOSQ9NXC5 875 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 FAM8A1Q9UBU6 413 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 UBQLN2Q9UHD9 624 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 KIF25Q9UIL4 384 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 RAB23Q9ULC3 237 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 SCML1Q9UN30 329 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 CACNG2Q9Y698 323 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 A0A087WZ62 844 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 PRSS44E7EML9 344 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 CREG1O75629 220 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 RHOBTB1O94844 696 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ARSBP15848 533 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ERCC2P18074 760 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 TRIM23P36406 574 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 BTG1P62324 171 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 RPP38P78345 283 aaKnown RBP11.68□□□□□ -0.54
CAPN3-221ENST00000638141 HOXC5Q00444 222 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 CYP4F3Q08477 520 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 NPRL3Q12980 569 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 BAATQ14032 418 aaPredicted RBP11.68□□□□□ -0.54
CAPN3-221ENST00000638141 KCTD2Q14681 263 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 PDZK1Q5T2W1 519 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ESRP1Q6NXG1 681 aaKnown RBP11.68□□□□□ -0.54
CAPN3-221ENST00000638141 RNF135Q8IUD6 432 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 LAX1Q8IWV1 398 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 BBS7Q8IWZ6 715 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 PTGR2Q8N8N7 351 aaPredicted RBP11.68□□□□□ -0.54
CAPN3-221ENST00000638141 DNAJB8Q8NHS0 232 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 WBP1Q96G27 269 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 PRMT6Q96LA8 375 aaPredicted RBP11.68□□□□□ -0.54
CAPN3-221ENST00000638141 QRFPRQ96P65 431 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 NPY6RQ99463 290 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 APOL2Q9BQE5 337 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 WACQ9BTA9 647 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 CDCA4Q9BXL8 241 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 BARHL1Q9BZE3 327 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 ALG9Q9H6U8 611 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 RC3H2Q9HBD1 1191 aaKnown RBP11.68□□□□□ -0.54
CAPN3-221ENST00000638141 VPS9D1Q9Y2B5 631 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 SNX8Q9Y5X2 465 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 OTOFQ9HC10 1997 aa11.68□□□□□ -0.54
CAPN3-221ENST00000638141 LDOC1O95751 146 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-221ENST00000638141 TGM6O95932 706 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PTHP01270 115 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ITGB1P05556 798 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 SLC2A4P14672 509 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 HK1P19367 917 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 HAAOP46952 286 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 MAPKAPK2P49137 400 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 ALDH9A1P49189 494 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 RUNX1T1Q06455 604 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 BTN1A1Q13410 526 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 TMEM132DQ14C87 1099 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 CFAP77Q6ZQR2 320 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 FAM83AQ86UY5 434 aa11.67□□□□□ -0.54
CAPN3-221ENST00000638141 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms