RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MORF4L2Q15014 288 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 NKG7Q16617 165 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 HKDC1Q2TB90 917 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 TCTE1Q5JU00 501 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 TEDDM1Q5T9Z0 273 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 ZNF425Q6IV72 752 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 TTC29Q8NA56 475 aaPredicted RBP16.93■□□□□ 0.3
PNKP-230ENST00000638016 FBXO15Q8NCQ5 510 aaPredicted RBP16.93■□□□□ 0.3
PNKP-230ENST00000638016 C17orf62Q9BQA9 187 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 PPANQ9NQ55 473 aaKnown RBP16.93■□□□□ 0.3
PNKP-230ENST00000638016 P4HTMQ9NXG6 502 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 KLHL42Q9P2K6 505 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 PCDHGA9Q9Y5G4 932 aaKnown RBP16.93■□□□□ 0.3
PNKP-230ENST00000638016 COMMD10Q9Y6G5 202 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 TEX264Q9Y6I9 313 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 ASH1LQ9NR48 2969 aaKnown RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 UBR5O95071 2799 aaPredicted RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 HAT1O14929 419 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 P2RX6O15547 441 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 TTC4O95801 387 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 SKIV2L2P42285 1042 aaKnown RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 RPL21P46778 160 aaKnown RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 TBPL1P62380 186 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 FOXK1P85037 733 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 PRDX1Q06830 199 aaKnown RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 ARHGAP19Q14CB8 494 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 HIF1AQ16665 826 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 PHKG1Q16816 387 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 PRTGQ2VWP7 1150 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 SYDE1Q6ZW31 735 aaPredicted RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 MED25Q71SY5 747 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 OVCH1Q7RTY7 1134 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 ADCK2Q7Z695 626 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 PRSS58Q8IYP2 241 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 SHISA5Q8N114 240 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 PDIK1LQ8N165 341 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 GPATCH11Q8N954 259 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 TMEM102Q8N9M5 508 aaPredicted RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 PTERQ96BW5 349 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 LINGO1Q96FE5 620 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 OLFM1Q99784 485 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 MFRPQ9BY79 579 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 ENAMQ9NRM1 1142 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 IKZF3Q9UKT9 509 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 PDE10AQ9Y233 779 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 RUVBL1Q9Y265 456 aaKnown RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 SNX24Q9Y343 169 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 PSAT1Q9Y617 370 aa16.92■□□□□ 0.3
PNKP-230ENST00000638016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
PNKP-230ENST00000638016 SETXQ7Z333 2677 aaKnown RBP16.92■□□□□ 0.3
PNKP-230ENST00000638016 DOPEY2Q9Y3R5 2298 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 ZBTB14O43829 449 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 SRPX2O60687 465 aaPredicted RBP16.91■□□□□ 0.3
PNKP-230ENST00000638016 PIAS1O75925 651 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 TSPAN12O95859 305 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 CD97P48960 835 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 ZXDCQ2QGD7 858 aaPredicted RBP16.91■□□□□ 0.3
PNKP-230ENST00000638016 PRR30Q53SZ7 412 aaPredicted RBP16.91■□□□□ 0.3
PNKP-230ENST00000638016 DCAF10Q5QP82 559 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 THEMIS2Q5TEJ8 643 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 STEAP4Q687X5 459 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 FKBP10Q96AY3 582 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 SNF8Q96H20 258 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 OR2A5Q96R48 311 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 ATG10Q9H0Y0 220 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 GPR83Q9NYM4 423 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 MRPS2Q9Y399 296 aaKnown RBP16.91■□□□□ 0.3
PNKP-230ENST00000638016 SHANK1Q9Y566 2161 aa16.91■□□□□ 0.3
PNKP-230ENST00000638016 EFCAB8A8MWE9 144 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 H7BY64 318 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 ONECUT2O95948 504 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 PAFAH1B1P43034 410 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 C2orf54Q08AI8 447 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 PDIA2Q13087 525 aaKnown RBP16.9■□□□□ 0.3
PNKP-230ENST00000638016 HECTD2Q5U5R9 776 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 CAPN12Q6ZSI9 719 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 CSNK1A1LQ8N752 337 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 AMER2Q8N7J2 671 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 RBMXL3Q8N7X1 1067 aaKnown RBP16.9■□□□□ 0.3
PNKP-230ENST00000638016 ALKBH8Q96BT7 664 aaKnown RBP16.9■□□□□ 0.3
PNKP-230ENST00000638016 CABS1Q96KC9 395 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 PRAP1Q96NZ9 151 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 NAT9Q9BTE0 207 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 DPH5Q9H2P9 285 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 TAS2R13Q9NYV9 303 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 CDC23Q9UJX2 597 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 FBXL4Q9UKA2 621 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 HS3ST3B1Q9Y662 390 aa16.9■□□□□ 0.3
PNKP-230ENST00000638016 CNTRLQ7Z7A1 2325 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 CCDC188H7C350 402 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 SOCS6O14544 535 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 FDXRP22570 491 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 HSD17B2P37059 387 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 RRADP55042 308 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 ARL4CP56559 192 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 SYT16Q17RD7 645 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 FAM214AQ32MH5 1076 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 VWA2Q5GFL6 755 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 YOD1Q5VVQ6 348 aaPredicted RBP16.89■□□□□ 0.29
PNKP-230ENST00000638016 PRAMEF13Q5VWM6 474 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms