RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 KIR2DS3Q14952 304 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 ANGPT1Q15389 498 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 DUOXA1Q1HG43 343 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 LACTB2Q53H82 288 aaPredicted RBP11.35□□□□□ -0.59
CLN6-223ENST00000637823 SGO1Q5FBB7 561 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 CATSPEREQ5SY80 951 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 FAM219BQ5XKK7 198 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 ICE2Q659A1 982 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 OGFOD2Q6N063 350 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 MED27Q6P2C8 311 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 OGFOD3Q6PK18 319 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 Q6ZSR9 355 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 TMPRSS11BQ86T26 416 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 ADGRF3Q8IZF5 1079 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 KRT78Q8N1N4 520 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 ZNF548Q8NEK5 533 aaPredicted RBP11.35□□□□□ -0.59
CLN6-223ENST00000637823 ABHD11Q8NFV4 315 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 OR4K1Q8NGD4 311 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 OR2A1Q8NGT9 310 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 OR2T11Q8NH01 316 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 CEP76Q8TAP6 659 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 WDR20Q8TBZ3 569 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 SELENOMQ8WWX9 145 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 PATE1Q8WXA2 126 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 PIGKQ92643 395 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 UBE2E3Q969T4 207 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 MTFMTQ96DP5 389 aaKnown RBP11.35□□□□□ -0.59
CLN6-223ENST00000637823 ACAT2Q9BWD1 397 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 PITHD1Q9GZP4 211 aaPredicted RBP11.35□□□□□ -0.59
CLN6-223ENST00000637823 TWSG1Q9GZX9 223 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 ZNF385DQ9H6B1 395 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 FARSBQ9NSD9 589 aaKnown RBP11.35□□□□□ -0.59
CLN6-223ENST00000637823 GEMIN8Q9NWZ8 242 aaKnown RBP11.35□□□□□ -0.59
CLN6-223ENST00000637823 TAC3Q9UHF0 121 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 SH2B3Q9UQQ2 575 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 TSC22D4Q9Y3Q8 395 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 PCDHGA2Q9Y5H1 932 aa11.35□□□□□ -0.59
CLN6-223ENST00000637823 B4DGG1 531 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 DFNA5O60443 496 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 PEX11AO75192 247 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 CHRM5P08912 532 aaPredicted RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 HSD3B1P14060 373 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 HSD3B2P26439 372 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 VARSP26640 1264 aaKnown RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 CMPK1P30085 196 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 ARRB1P49407 418 aaPredicted RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 ATP4BP51164 291 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 CCR8P51685 355 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 ERVK-8P63133 956 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 BNIP1Q12981 228 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 CSTF3Q12996 717 aaKnown RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 SIM2Q14190 667 aaPredicted RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 PLCL1Q15111 1095 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 IMPG1Q17R60 797 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 ATP6AP1LQ52LC2 224 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 C6orf136Q5SQH8 315 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 TMEM26Q6ZUK4 368 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 C17orf82Q86X59 251 aaPredicted RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 FAM129CQ86XR2 697 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 PARP9Q8IXQ6 854 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 LAS2Q8IYD9 372 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 OR7G3Q8NG95 312 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 PRR11Q96HE9 360 aaPredicted RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 NSL1Q96IY1 281 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 PPP3R2Q96LZ3 170 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 CATSPER2Q96P56 530 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 ELF4Q99607 663 aaPredicted RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 AIF1LQ9BQI0 150 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 NT5DC2Q9H857 520 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 UCK1Q9HA47 277 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 BRF2Q9HAW0 419 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 MRPS30Q9NP92 439 aaKnown RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 TMEM184CQ9NVA4 438 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 ARMCX1Q9P291 453 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 ADGRE2Q9UHX3 823 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 G3BP2Q9UN86 482 aaKnown RBP11.34□□□□□ -0.59
CLN6-223ENST00000637823 CCL27Q9Y4X3 112 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 ENTPD2Q9Y5L3 495 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 RALGAPA1Q6GYQ0 2036 aa11.34□□□□□ -0.59
CLN6-223ENST00000637823 PIPSLA2A3N6 862 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 OR6C74A6NCV1 312 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 ISM1B1AKI9 464 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 NPIPB8E9PQR5 432 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 H7BY64 318 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 FOXE1O00358 373 aaPredicted RBP11.33□□□□□ -0.6
CLN6-223ENST00000637823 BTN3A3O00478 584 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 LSM1O15116 133 aaKnown RBP11.33□□□□□ -0.6
CLN6-223ENST00000637823 FKBP9O95302 570 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 PCSK2P16519 638 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 PRPH2P23942 346 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 PSMB5P28074 263 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 FASLGP48023 281 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 NEK2P51955 445 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 NUBP1P53384 320 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 PHEXP78562 749 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 HHEXQ03014 270 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 EMX2Q04743 252 aa11.33□□□□□ -0.6
CLN6-223ENST00000637823 KLF10Q13118 480 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms