RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CORO1CQ9ULV4 474 aaPredicted RBP13.21□□□□□ -0.29
PNKP-228ENST00000637325 VWA7Q9Y334 891 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 LOC105369274A0A096LPK9 316 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 LOC102723532A0A0G2JNH3 316 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 OR2A25A4D2G3 310 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 FITM1A5D6W6 292 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 A6NL46 340 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 H0YGG7 62 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 FANCGO15287 622 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 SLC16A5O15375 505 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 NRP2O60462 931 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 OR1D4P47884 311 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 PGDP52209 483 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 IL2P60568 153 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 ARF3P61204 181 aaPredicted RBP13.2□□□□□ -0.3
PNKP-228ENST00000637325 ETF1P62495 437 aaKnown RBP13.2□□□□□ -0.3
PNKP-228ENST00000637325 TIAL1Q01085 375 aaKnown RBP eCLIP13.2□□□□□ -0.3
PNKP-228ENST00000637325 C2orf54Q08AI8 447 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 MGAT5Q09328 741 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 HECTD2Q5U5R9 776 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 FAM45BPQ6NSW5 357 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 MRPL14Q6P1L8 145 aaKnown RBP13.2□□□□□ -0.3
PNKP-228ENST00000637325 FBXO42Q6P3S6 717 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 OVCH1Q7RTY7 1134 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 PAQR7Q86WK9 346 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 OR4N4Q8N0Y3 316 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 METTL27Q8N6F8 245 aaPredicted RBP13.2□□□□□ -0.3
PNKP-228ENST00000637325 SPATA4Q8NEY3 305 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 OR2Y1Q8NGV0 311 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 FAM45AQ8TCE6 357 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 RERGQ96A58 199 aaPredicted RBP13.2□□□□□ -0.3
PNKP-228ENST00000637325 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 FKBP10Q96AY3 582 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 ALKBH8Q96BT7 664 aaKnown RBP13.2□□□□□ -0.3
PNKP-228ENST00000637325 CABS1Q96KC9 395 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 FER1L6-AS2Q96M78 137 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 CCDC138Q96M89 665 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 TRIM54Q9BYV2 358 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 DPH5Q9H2P9 285 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 PARVBQ9HBI1 364 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 CCDC177Q9NQR7 707 aaPredicted RBP13.2□□□□□ -0.3
PNKP-228ENST00000637325 MAU2Q9Y6X3 613 aa13.2□□□□□ -0.3
PNKP-228ENST00000637325 K7EM74 188 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 WISP1O95388 367 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 IGHEP01854 428 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 ALBP02768 609 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 SAT1P21673 171 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 IMPA1P29218 277 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 CASRP41180 1078 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 GCGRP47871 477 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 KCNC4Q03721 635 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 TLE1Q04724 770 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 SP140Q13342 867 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 FRG1Q14331 258 aaKnown RBP13.19□□□□□ -0.3
PNKP-228ENST00000637325 MUM1Q2TAK8 710 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 MRGPREQ86SM8 312 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 ZBED8Q8IZ13 594 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 CSNK1A1LQ8N752 337 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.19□□□□□ -0.3
PNKP-228ENST00000637325 WDR83Q9BRX9 315 aaKnown RBP13.19□□□□□ -0.3
PNKP-228ENST00000637325 PCBD2Q9H0N5 130 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 PLAC1Q9HBJ0 212 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 ZNF304Q9HCX3 659 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 SLC22A11Q9NSA0 550 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 WHRNQ9P202 907 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 STOX2Q9P2F5 926 aaPredicted RBP13.19□□□□□ -0.3
PNKP-228ENST00000637325 ADAMTS6Q9UKP5 1117 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 PDE10AQ9Y233 779 aa13.19□□□□□ -0.3
PNKP-228ENST00000637325 PCDHGA9Q9Y5G4 932 aaKnown RBP13.19□□□□□ -0.3
PNKP-228ENST00000637325 MYO18BQ8IUG5 2567 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 IGKV1-8A0A0C4DH67 115 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 E7ESA3 106 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 H7BY64 318 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 TXNDC9O14530 226 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 RAD51CO43502 376 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 CNOT3O75175 753 aaKnown RBP13.18□□□□□ -0.3
PNKP-228ENST00000637325 ONECUT2O95948 504 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 EZRP15311 586 aaKnown RBP13.18□□□□□ -0.3
PNKP-228ENST00000637325 FDXRP22570 491 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 FOXL2P58012 376 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 OCA2Q04671 838 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 FASTKD3Q14CZ7 662 aaKnown RBP13.18□□□□□ -0.3
PNKP-228ENST00000637325 COLEC12Q5KU26 742 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 PRAMEF13Q5VWM6 474 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 ZNF425Q6IV72 752 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 CAPN12Q6ZSI9 719 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 STRA8Q7Z7C7 330 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 LRRC56Q8IYG6 542 aaPredicted RBP13.18□□□□□ -0.3
PNKP-228ENST00000637325 CLEC1AQ8NC01 280 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 PYROXD1Q8WU10 500 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 PRAP1Q96NZ9 151 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 YIPF2Q9BWQ6 316 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 ATG10Q9H0Y0 220 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 EPN3Q9H201 632 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 SOX17Q9H6I2 414 aaPredicted RBP13.18□□□□□ -0.3
PNKP-228ENST00000637325 WDR54Q9H977 334 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms