RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PAIP1Q9H074 479 aaKnown RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 TNKS2Q9H2K2 1166 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 KAT8Q9H7Z6 458 aaKnown RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 THAP10Q9P2Z0 257 aaPredicted RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 NPIPB15A6NHN6 443 aaPredicted RBP16.93■□□□□ 0.3
FAM3A-222ENST00000621967 SHISA7A6NL88 538 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 TTC34A8MYJ7 566 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 NPC1O15118 1278 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 ERN1O75460 977 aaKnown RBP16.93■□□□□ 0.3
FAM3A-222ENST00000621967 CLDN9O95484 217 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 KRT6AP02538 564 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 KRT6BP04259 564 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 ANXA5P08758 320 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 IL1RNP18510 177 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 SERPINA4P29622 427 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 RECQLP46063 649 aaPredicted RBP16.93■□□□□ 0.3
FAM3A-222ENST00000621967 KRT6CP48668 564 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 GZMMP51124 257 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 CCINQ13939 588 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 UBXN2BQ14CS0 331 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 GGTA1PQ4G0N0 100 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 RBM48Q5RL73 367 aaKnown RBP16.93■□□□□ 0.3
FAM3A-222ENST00000621967 GPR107Q5VW38 600 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 Q6ZVU0 165 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 THAP5Q7Z6K1 395 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 ZNF366Q8N895 744 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 OR13F1Q8NGS4 319 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 OR52E6Q96RD3 313 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 MBOAT4Q96T53 435 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 CPPED1Q9BRF8 314 aaPredicted RBP16.93■□□□□ 0.3
FAM3A-222ENST00000621967 ACPTQ9BZG2 426 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 TOR3AQ9H497 397 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 SLC32A1Q9H598 525 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 MAGIXQ9H6Y5 334 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 ACTR8Q9H981 624 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 PREBQ9HCU5 417 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 SERHLQ9NQF3 203 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 ZDHHC3Q9NYG2 299 aa16.93■□□□□ 0.3
FAM3A-222ENST00000621967 NUP214P35658 2090 aaPredicted RBP16.93■□□□□ 0.3
FAM3A-222ENST00000621967 MUC22E2RYF6 1773 aaPredicted RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 CST1P01037 141 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 PRPH2P23942 346 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 POLR2IP36954 125 aaKnown RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 IL12RB1P42701 662 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 KIR2DL1P43626 348 aaPredicted RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 CLDN8P56748 225 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 STARD6P59095 220 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 SNRPD1P62314 119 aaKnown RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 PHC1P78364 1004 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 ZXDAP98168 799 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 ARHGEF7Q14155 803 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 GBX1Q14549 363 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 MYBPC3Q14896 1274 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 GTDC1Q4AE62 458 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 SGO1Q5FBB7 561 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 DGKKQ5KSL6 1271 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 TTC23Q5W5X9 447 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 CRTC1Q6UUV9 634 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 TMEM26Q6ZUK4 368 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 TRMT11Q7Z4G4 463 aaKnown RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 OR2AP1Q8NGE2 309 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 LZICQ8WZA0 190 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 POP5Q969H6 163 aaKnown RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 SDCCAG3Q96C92 435 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 KCNH6Q9H252 994 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 SLC6A13Q9NSD5 602 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 DCAF13Q9NV06 445 aaKnown RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 INVSQ9Y283 1065 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 PPIL1Q9Y3C6 166 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 PLXNA2O75051 1894 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 IGLV3-16A0A075B6K0 115 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 KCNE1BA0A087WTH5 132 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 A0A096LPI6 279 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 ANTXRLA6NF34 631 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 NPIPB8E9PQR5 432 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 STK25O00506 426 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 HLA-EP13747 358 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 HOXB6P17509 224 aaKnown RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 STT3AP46977 705 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 RPS14P62263 151 aaKnown RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 B4GALNT1Q00973 533 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 LRRC32Q14392 662 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 SDE2Q6IQ49 451 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 DNAJC14Q6Y2X3 702 aaPredicted RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 CHST15Q7LFX5 561 aaPredicted RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 LRRC70Q7Z2Q7 622 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 CROCCP3Q8IVE0 287 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 C8orf59Q8N0T1 100 aaPredicted RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 PAF1Q8N7H5 531 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 HDAC2Q92769 488 aaKnown RBP16.92■□□□□ 0.3
FAM3A-222ENST00000621967 ECHDC3Q96DC8 303 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 PLGRKTQ9HBL7 147 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 LTB4R2Q9NPC1 389 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 FAM118AQ9NWS6 357 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 HCN2Q9UL51 889 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 PDE10AQ9Y233 779 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 PCDHB14Q9Y5E9 798 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 GMEB1Q9Y692 573 aa16.92■□□□□ 0.3
FAM3A-222ENST00000621967 NCOR1O75376 2440 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 EDDM13A0A1B0GTR0 161 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms