RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 KANK2Q63ZY3 851 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 FRG2Q64ET8 278 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 C10orf111Q8N326 155 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 RAB3IL1Q8TBN0 382 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 FRG2BQ96QU4 278 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 IKZF5Q9H5V7 419 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 RIC8BQ9NVN3 520 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 KLF15Q9UIH9 416 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 UTS2RQ9UKP6 389 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 TNPO3Q9Y5L0 923 aaKnown RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 LTBP2Q14767 1821 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 BTN3A3O00478 584 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 COX7A2P14406 83 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 C5AR1P21730 350 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 GPX3P22352 226 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 CDKN2CP42773 168 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 PARGQ86W56 976 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 KCT2Q8NC54 265 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 TMIEQ8NEW7 156 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 JADE3Q92613 823 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 LRGUKQ96M69 825 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 SLC6A18Q96N87 628 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 CDCA3Q99618 268 aaPredicted RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 C17orf62Q9BQA9 187 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 APOOQ9BUR5 198 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 CTPS2Q9NRF8 586 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 VAPAQ9P0L0 249 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 FBXW2Q9UKT8 454 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 A0A1W2PS29 197 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 KRBA1A5PL33 1030 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 MGAT4DA6NG13 374 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 ANXA4P09525 319 aaPredicted RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 TNFRSF1BP20333 461 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 LRRC74AQ0VAA2 488 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 MAPKAPK3Q16644 382 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 ARHGAP24Q8N264 748 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 FBXW8Q8N3Y1 598 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS11-208ENST00000621676 ZNF557Q8N988 423 aaPredicted RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 OR7G3Q8NG95 312 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 RP9Q8TA86 221 aaKnown RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 ZNF483Q8TF39 744 aaPredicted RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 CANT1Q8WVQ1 401 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 CIDECQ96AQ7 238 aaPredicted RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 EXOSC8Q96B26 276 aaKnown RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 CLIP3Q96DZ5 547 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 CIB1Q99828 191 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 ZDHHC5Q9C0B5 715 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 RSPH9Q9H1X1 276 aaPredicted RBP10.18□□□□□ -0.78
VPS11-208ENST00000621676 RNPEPL1Q9HAU8 725 aa10.18□□□□□ -0.78
VPS11-208ENST00000621676 SLCO1B7G3V0H7 640 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 LSM1O15116 133 aaKnown RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 PI15O43692 258 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 LCMT2O60294 686 aaKnown RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 SEMA4FO95754 770 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 NPPBP16860 134 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 PRLHRP49683 370 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 RPS21P63220 83 aaKnown RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 RPL6Q02878 288 aaKnown RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 CDC16Q13042 620 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 KRT72Q14CN4 511 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 IZUMO2Q6UXV1 221 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 MTSS1LQ765P7 747 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 KIAA0907Q7Z7F0 614 aaPredicted RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 HORMAD1Q86X24 394 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 LCN9Q8WX39 176 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 LRTOMTQ8WZ04 291 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 CCDC138Q96M89 665 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 YIPF2Q9BWQ6 316 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 DYRK1BQ9Y463 629 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 CACNA1CQ13936 2221 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 DMWDQ09019 674 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 STX5Q13190 355 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 CCNIQ14094 377 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 DEFB133Q30KQ1 61 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 ZIK1Q3SY52 487 aaPredicted RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 RNF111Q6ZNA4 994 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 CPSF7Q8N684 471 aaKnown RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 CXorf40BQ96DE9 158 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 BMFQ96LC9 184 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 RNF145Q96MT1 663 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 CENPKQ9BS16 269 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 ZCCHC2Q9C0B9 1178 aaKnown RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 EQTNQ9NQ60 294 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 EIF3LQ9Y262 564 aaKnown RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 SNRNP200O75643 2136 aaKnown RBP10.17□□□□□ -0.78
VPS11-208ENST00000621676 NME4O00746 187 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 RGS14O43566 566 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 NUAK1O60285 661 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 ZNF682O95780 498 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 CEACAM5P06731 702 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 LAMP1P11279 417 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 GNAZP19086 355 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 MAGP20916 626 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 ME2P23368 584 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 SLC19A1P41440 591 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 SEPHS1P49903 392 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 OR4D2P58180 307 aa10.17□□□□□ -0.78
VPS11-208ENST00000621676 SQLEQ14534 574 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms