RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 NRG4Q8WWG1 115 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 TEX37Q96LM6 180 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 SLC7A5P2Q9GIP4 190 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 CACYBPQ9HB71 228 aaKnown RBP15.22■□□□□ 0.03
CPSF1-213ENST00000620219 MRPS30Q9NP92 439 aaKnown RBP15.22■□□□□ 0.03
CPSF1-213ENST00000620219 SCOCQ9UIL1 159 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 FAM234BA2RU67 622 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 BBIP1A8MTZ0 92 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 BCKDHAP12694 445 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 MED21Q13503 144 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 CDKN3Q16667 212 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 KIAA1161Q6NSJ0 714 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 CYHR1Q6ZMK1 362 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 CHSY3Q70JA7 882 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 EXOSC8Q96B26 276 aaKnown RBP15.22■□□□□ 0.03
CPSF1-213ENST00000620219 APIPQ96GX9 242 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 TPD52L3Q96J77 140 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 BBS4Q96RK4 519 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 RSPH9Q9H1X1 276 aaPredicted RBP15.22■□□□□ 0.03
CPSF1-213ENST00000620219 ALG2Q9H553 416 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 SLAMF8Q9P0V8 285 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 SLC23A2Q9UGH3 650 aa15.22■□□□□ 0.03
CPSF1-213ENST00000620219 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
CPSF1-213ENST00000620219 PRORSD1PA6NEY8 169 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 AGBL4Q5VU57 503 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 PPCDCQ96CD2 204 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 EFCAB11Q9BUY7 163 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 FBP2O00757 339 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 NELFEP18615 380 aaKnown RBP15.21■□□□□ 0.03
CPSF1-213ENST00000620219 NDUFV2P19404 249 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 DPP6P42658 865 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 ADPRHP54922 357 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 VAC14Q08AM6 782 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 TJAP1Q5JTD0 557 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 RETREG3Q86VR2 466 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 HUS1BQ8NHY5 278 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 EGLN2Q96KS0 407 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 HOPXQ9BPY8 73 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-213ENST00000620219 PHF7Q9BWX1 381 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-213ENST00000620219 SLC29A3Q9BZD2 475 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 FOXQ1Q9C009 403 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 TRPS1Q9UHF7 1281 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 ANAPC1Q9H1A4 1944 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 SLC16A5O15375 505 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 C1orf105O95561 183 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 DRD3P35462 400 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 IRX1P78414 480 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-213ENST00000620219 PQLC1Q8N2U9 271 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 OR2L2Q8NH16 312 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 PRUNE2Q8WUY3 3088 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 MRGPRX1Q96LB2 322 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 MACROD1Q9BQ69 325 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 AIG1Q9NVV5 245 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 FBXW2Q9UKT8 454 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 ACSL5Q9ULC5 683 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 RUVBL1Q9Y265 456 aaKnown RBP15.21■□□□□ 0.03
CPSF1-213ENST00000620219 PPIL1Q9Y3C6 166 aa15.21■□□□□ 0.03
CPSF1-213ENST00000620219 A0A0J9YVX5 310 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 PGRP06401 933 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 POLR2CP19387 275 aaPredicted RBP15.21■□□□□ 0.02
CPSF1-213ENST00000620219 HNRNPA2B1P22626 353 aaKnown RBP15.21■□□□□ 0.02
CPSF1-213ENST00000620219 TPMTP51580 245 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 RAB8AP61006 207 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 RPL6Q02878 288 aaKnown RBP15.21■□□□□ 0.02
CPSF1-213ENST00000620219 TRIM25Q14258 630 aaKnown RBP15.21■□□□□ 0.02
CPSF1-213ENST00000620219 MFSD4BQ5TF39 518 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 Q6ZSR6 202 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 OR2T12Q8NG77 320 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 RNF31Q96EP0 1072 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 SOHLH2Q9NX45 425 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 ZNF225Q9UK10 706 aa15.21■□□□□ 0.02
CPSF1-213ENST00000620219 A0A1W2PP18 115 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 TCF3P15923 654 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 PEX19P40855 299 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 MAPK12P53778 367 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 TP53BP2Q13625 1128 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 ZNF740Q8NDX6 193 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 CYGBQ8WWM9 190 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 KLHDC7BQ96G42 594 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 AHCYL2Q96HN2 611 aaKnown RBP15.2■□□□□ 0.02
CPSF1-213ENST00000620219 RDH14Q9HBH5 336 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 SEC16AO15027 2179 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 C15orf38-AP3S2A0A0A6YYH1 394 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 COL9A1P20849 921 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 IMPA1P29218 277 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 TMEM52BQ4KMG9 183 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 MTX3Q5HYI7 312 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 NOXRED1Q6NXP6 359 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 FAM83HQ6ZRV2 1179 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-213ENST00000620219 ZBTB49Q6ZSB9 765 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 Q6ZSR9 355 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 ARPINQ7Z6K5 226 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 DEFB123Q8N688 67 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 SMRP1Q8NCR6 262 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 OR10Q1Q8NGQ4 319 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 FBXL8Q96CD0 374 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 ITCHQ96J02 903 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 HAUS8Q9BT25 410 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 DGKBQ9Y6T7 804 aa15.2■□□□□ 0.02
CPSF1-213ENST00000620219 MAN2B1O00754 1011 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms