RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	UNC5D	Q6UXZ4	953 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	USP51	Q70EK9	711 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GPR156	Q8NFN8	814 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ABTB1	Q969K4	478 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	THAP11	Q96EK4	314 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FRG2B	Q96QU4	278 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	LYSMD1	Q96S90	227 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MYOC	Q99972	504 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DGCR6L	Q9BY27	220 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SLC29A3	Q9BZD2	475 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	AMBRA1	Q9C0C7	1298 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	REXO4	Q9GZR2	422 aa	Known RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RMND5A	Q9H871	391 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DNAJC11	Q9NVH1	559 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DNAH14	Q0VDD8	3507 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	HIDE1	A8MVS5	230 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390		E7EQ34	232 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390		H3BMQ9	156 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	UBL4A	P11441	157 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MATN1	P21941	496 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF551	Q7Z340	670 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	THAP5	Q7Z6K1	395 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CLECL1	Q8IZS7	167 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ING5	Q8WYH8	240 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	HSPBAP1	Q96EW2	488 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	COG8	Q96MW5	612 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	BARD1	Q99728	777 aa	Known RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ABCG4	Q9H172	646 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DCAF13	Q9NV06	445 aa	Known RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ATAD3A	Q9NVI7	634 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FPGT	O14772	594 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SCEL	O95171	688 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	C8G	P07360	202 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ABCB1	P08183	1280 aa	Predicted RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	C7	P10643	843 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	COX7A2	P14406	83 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CD247	P20963	164 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	BDKRB1	P46663	353 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PFN3	P60673	137 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	C16orf72	Q14CZ0	275 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SYTL3	Q4VX76	610 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	LRRC70	Q7Z2Q7	622 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	AADAT	Q8N5Z0	425 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ARL6IP6	Q8N6S5	226 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	WRAP53	Q9BUR4	548 aa	Known RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	KCNH6	Q9H252	994 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	C8orf4	Q9NR00	106 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TMEM45A	Q9NWC5	275 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	OGDHL	Q9ULD0	1010 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	COQ6	Q9Y2Z9	468 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FADS2P1	A8MWK0	482 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390		H0YAE9	185 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TSPAN6	O43657	245 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF254	O75437	659 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FKBP9	O95302	570 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GBA	P04062	536 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	NTRK1	P04629	796 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	AMD1	P17707	334 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CD22	P20273	847 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	AQP1	P29972	269 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	KIR3DL1	P43629	444 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CTSC	P53634	463 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	POLR2L	P62875	67 aa	Known RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DCTN2	Q13561	401 aa	Known RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SIM2	Q14190	667 aa	Predicted RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	XKR5	Q6UX68	686 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ANGPTL8	Q6UXH0	198 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FKBP9P1	Q75LS8	142 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	VTCN1	Q7Z7D3	282 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	METTL3	Q86U44	580 aa	Known RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	EID3	Q8N140	333 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PARP8	Q8N3A8	854 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CCDC138	Q96M89	665 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CCDC115	Q96NT0	180 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MBOAT4	Q96T53	435 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TCF25	Q9BQ70	676 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TIMMDC1	Q9NPL8	285 aa		13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	WARS2	Q9UGM6	360 aa	Known RBP	13.46	□□□□□ -0.25
CACNA1C-231	ENST00000616390	XIRP2	A4UGR9	3374 aa		13.46	□□□□□ -0.26
CACNA1C-231	ENST00000616390	EVPLL	A8MZ36	301 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	MAGEB3	O15480	346 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	ERN1	O75460	977 aa	Known RBP	13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	DCT	P40126	519 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	HLCS	P50747	726 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	ERVFC1	P60507	584 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	GPR149	Q86SP6	731 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	RBM23	Q86U06	439 aa	Known RBP	13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	LURAP1L	Q8IV03	231 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	ZDHHC21	Q8IVQ6	265 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	ADHFE1	Q8IWW8	467 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	RAVER1	Q8IY67	606 aa	Known RBP	13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	ASZ1	Q8WWH4	475 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	CMTM7	Q96FZ5	175 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	ZBP1	Q9H171	429 aa		13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CACNA1C-231	ENST00000616390	VNN3	Q9NY84	501 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms