RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 NETO2Q8NC67 525 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SLC37A3Q8NCC5 494 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SPON2Q9BUD6 331 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 MFSD1Q9H3U5 465 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ACTL7AQ9Y615 435 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 A0A0G2JND7 137 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 LOC390937A0A1W2PQ73 354 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 NEDD8-MDP1E9PL57 170 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 HOXD4P09016 255 aaPredicted RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 GLDCP23378 1020 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 TNFRSF4P43489 277 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 DGKGP49619 791 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 WDR4P57081 412 aaKnown RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 HTR4Q13639 388 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 RIN1Q13671 783 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 PDK4Q16654 411 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 RASGRP3Q8IV61 690 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 KLHL36Q8N4N3 616 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 AVL9Q8NBF6 648 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 IL17RDQ8NFM7 739 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 MCCC1Q96RQ3 725 aaPredicted RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 MYADMQ96S97 322 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 LINC00597Q9H2U6 94 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 COG4Q9H9E3 785 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 FBRSQ9HAH7 460 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 ZDHHC4Q9NPG8 344 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 NLE1Q9NVX2 485 aaPredicted RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 CCDC59Q9P031 241 aaKnown RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 PNMA8BQ9ULN7 279 aaPredicted RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 CLEC4EQ9ULY5 219 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 WNT6Q9Y6F9 365 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 RGSL1A5PLK6 1076 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 LDB2O43679 373 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 NTRK1P04629 796 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 YES1P07947 543 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 IMPDH1P20839 514 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 GPC1P35052 558 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 ZNF140P52738 457 aaPredicted RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 TEKQ02763 1124 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 TEDDM1Q5T9Z0 273 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 FAM91A1Q658Y4 838 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 MBLAC2Q68D91 279 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 ZNF544Q6NX49 715 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 TMEM26Q6ZUK4 368 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 ZNF767PQ75MW2 155 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 CCDC103Q8IW40 242 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 PQLC1Q8N2U9 271 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 ZCCHC7Q8N3Z6 543 aaKnown RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 OR52H1Q8NGJ2 320 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 PDCD6IPQ8WUM4 868 aaKnown RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 ING5Q8WYH8 240 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 UFD1Q92890 307 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 MYO19Q96H55 970 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 KLHL32Q96NJ5 620 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 ASB2Q96Q27 587 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 MVB12BQ9H7P6 319 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 ZNF556Q9HAH1 456 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 POLE4Q9NR33 117 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 PNPLA3Q9NST1 481 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 EXTL2Q9UBQ6 330 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 MTO1Q9Y2Z2 717 aaKnown RBP8.57□□□□□ -1.04
VPS11-206ENST00000614944 RAI2Q9Y5P3 530 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 PLXNA2O75051 1894 aa8.57□□□□□ -1.04
VPS11-206ENST00000614944 PDZK1P1A8MUH7 402 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 RFXAPO00287 272 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 DLGAP3O95886 979 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 DLDP09622 509 aaKnown RBP8.56□□□□□ -1.04
VPS11-206ENST00000614944 OGNP20774 298 aaKnown RBP8.56□□□□□ -1.04
VPS11-206ENST00000614944 RGRP47804 291 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 LEPRP48357 1165 aaKnown RBP8.56□□□□□ -1.04
VPS11-206ENST00000614944 CAPZA1P52907 286 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 PRKAA2P54646 552 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 RAD23AP54725 363 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 RUNX3Q13761 415 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 PPA1Q15181 289 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 MAPK11Q15759 364 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 LDLRAP1Q5SW96 308 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 SULT1C3Q6IMI6 304 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 BRAT1Q6PJG6 821 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 SNX29P2Q8IUI4 249 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 CLEC4FQ8N1N0 589 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 TMIEQ8NEW7 156 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 GRIN3AQ8TCU5 1115 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 PIH1D2Q8WWB5 315 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 PTP4A1Q93096 173 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 ZC3H10Q96K80 434 aaKnown RBP8.56□□□□□ -1.04
VPS11-206ENST00000614944 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
VPS11-206ENST00000614944 NPAP1Q9NZP6 1156 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 SNX6Q9UNH7 406 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 ARHGEF9O43307 516 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 BANF1O75531 89 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 SESN2P58004 480 aaPredicted RBP8.56□□□□□ -1.04
VPS11-206ENST00000614944 KCNJ10P78508 379 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 CDKN3Q16667 212 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 TYSND1Q2T9J0 566 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 CERCAMQ5T4B2 595 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 TANGO2Q6ICL3 276 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 ZNF852Q6ZMS4 543 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 TPGS1Q6ZTW0 290 aa8.56□□□□□ -1.04
VPS11-206ENST00000614944 NUDT18Q6ZVK8 323 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms