RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 TPBGLP0DKB5 382 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 MLNP12872 115 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 AGAP20933 346 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 AGTR2P50052 363 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 EIF3BP55884 814 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 VSX2P58304 361 aaPredicted RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 RPS15AP62244 130 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 BASP1P80723 227 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 MEF2AQ02078 507 aaPredicted RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 KLC1Q07866 573 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 ILF2Q12905 390 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 ART3Q13508 389 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 GRB7Q14451 532 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 GBX1Q14549 363 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 RPS6KA1Q15418 735 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 ZRSR2Q15696 482 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 PRTGQ2VWP7 1150 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 ABHD17BQ5VST6 288 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 ATG9BQ674R7 924 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 UGT3A1Q6NUS8 523 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 LRRC8BQ6P9F7 803 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 COX15Q7KZN9 410 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 PCGF5Q86SE9 256 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 LGI4Q8N135 537 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 TBC1D19Q8N5T2 526 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 CSNK1A1LQ8N752 337 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 FAM98AQ8NCA5 519 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 TRIM58Q8NG06 486 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 OR2A1Q8NGT9 310 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 OR9A1PQ8NGU1 263 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 GRHL3Q8TE85 626 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 NAT14Q8WUY8 206 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 NR4A3Q92570 626 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 KCNJ9Q92806 393 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 CNDP1Q96KN2 507 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 NAP1L3Q99457 506 aaPredicted RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 PLCD4Q9BRC7 762 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 KIFC1Q9BW19 673 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 SOX17Q9H6I2 414 aaPredicted RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 XAB2Q9HCS7 855 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 SLC22A11Q9NSA0 550 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 RYDENQ9NUL5 291 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 TRPC4Q9UBN4 977 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 CTSFQ9UBX1 484 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 PLAGL1Q9UM63 463 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 R3HDM2Q9Y2K5 976 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 REXO2Q9Y3B8 237 aaKnown RBP6.9□□□□□ -1.3
TARDBP-216ENST00000614494 DUSP10Q9Y6W6 482 aa6.9□□□□□ -1.3
TARDBP-216ENST00000614494 PIKFYVEQ9Y2I7 2098 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 RELNP78509 3460 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 CREBBPQ92793 2442 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 PRRC2CQ9Y520 2896 aaKnown RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 KCNE1BA0A087WTH5 132 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 LOC102723996A0A087X1L8 192 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 E2F3O00716 465 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 LRRTM2O43300 516 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ZBTB14O43829 449 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 CTSVO60911 334 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 CNOT3O75175 753 aaKnown RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 JRKO75564 520 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 RASAL1O95294 804 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 HEXBP07686 556 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 PRR35P0CG20 571 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 PRSS56P0CW18 603 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 C8orf89P0DMQ9 161 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 CHRM3P20309 590 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ELAVL4P26378 380 aaKnown RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 GRK3P35626 688 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 SOX11P35716 441 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 SKIV2L2P42285 1042 aaKnown RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 TNFSF10P50591 281 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 PNLIPRP1P54315 467 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 EMP2P54851 167 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 CSE1LP55060 971 aaKnown RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 PRDX1Q06830 199 aaKnown RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 SP140Q13342 867 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 EXT1Q16394 746 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 FAM69BQ5VUD6 431 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ICE2Q659A1 982 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 RAD9BQ6WBX8 426 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ZNF662Q6ZS27 426 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 GAS2L3Q86XJ1 694 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ACRBPQ8NEB7 543 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ATG4AQ8WYN0 398 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 LPGAT1Q92604 370 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 C19orf60Q96EN9 201 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 KCNK17Q96T54 332 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 MIPEPQ99797 713 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 FAM167BQ9BTA0 163 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 DPH7Q9BTV6 452 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ZNF700Q9H0M5 742 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 CLK4Q9HAZ1 481 aaKnown RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ZNF160Q9HCG1 818 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 CHRAC1Q9NRG0 131 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 SLC2A6Q9UGQ3 507 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ZC3H7BQ9UGR2 993 aaKnown RBP6.89□□□□□ -1.31
TARDBP-216ENST00000614494 SOX13Q9UN79 622 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 TFR2Q9UP52 801 aa6.89□□□□□ -1.31
TARDBP-216ENST00000614494 ABCA12Q86UK0 2595 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms