RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 PHF10Q8WUB8 498 aaKnown RBP16.32■□□□□ 0.2
CSNK1E-215ENST00000612795 SKA2Q8WVK7 121 aaPredicted RBP16.32■□□□□ 0.2
CSNK1E-215ENST00000612795 RAD51AP1Q96B01 352 aa16.32■□□□□ 0.2
CSNK1E-215ENST00000612795 FAM118BQ9BPY3 351 aa16.32■□□□□ 0.2
CSNK1E-215ENST00000612795 COQ3Q9NZJ6 369 aa16.32■□□□□ 0.2
CSNK1E-215ENST00000612795 MKL2Q9ULH7 1088 aa16.32■□□□□ 0.2
CSNK1E-215ENST00000612795 PCDHGB6Q9Y5F9 930 aa16.32■□□□□ 0.2
CSNK1E-215ENST00000612795 KLK4Q9Y5K2 254 aa16.32■□□□□ 0.2
CSNK1E-215ENST00000612795 GOLGA6L19H0YKK7 550 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 VPS26AO75436 327 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 GPC4O75487 556 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 TPM3P06753 285 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 C8orf89P0DMQ9 161 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 BDKRB1P46663 353 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 TCEAL1Q15170 157 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 PRTGQ2VWP7 1150 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 AMER2Q8N7J2 671 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 AMER3Q8N944 861 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 FAM98AQ8NCA5 519 aaKnown RBP16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 LKAAEAR1Q8TD35 194 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 METTL21AQ8WXB1 218 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 ZNF354BQ96LW1 612 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 CHP1Q99653 195 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 NHEJ1Q9H9Q4 299 aaPredicted RBP16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 INTUQ9ULD6 942 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 PPT2Q9UMR5 302 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 RUVBL1Q9Y265 456 aaKnown RBP16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 MRFAP1Q9Y605 127 aa16.31■□□□□ 0.2
CSNK1E-215ENST00000612795 SPG11Q96JI7 2443 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 IQCF5A8MTL0 148 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 H0YGG7 62 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 SEC24DO94855 1032 aaPredicted RBP16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 TSPAN12O95859 305 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 CD99P14209 185 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 CD46P15529 392 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 CMPK1P30085 196 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 EMP3P54852 163 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 ARF3P61204 181 aaPredicted RBP16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 TRIM14Q14142 442 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 BTBD16Q32M84 506 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 CCDC38Q502W7 563 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 KCTD11Q693B1 232 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 FCRLBQ6BAA4 426 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 AFTPHQ6ULP2 937 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 TMEM205Q6UW68 189 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 C3P1Q6ZMU1 363 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 ZC3H7AQ8IWR0 971 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 KLHDC8BQ8IXV7 354 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 GHDCQ8N2G8 530 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 CSNK1A1LQ8N752 337 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 TMEM178AQ8NBL3 297 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 ACBD4Q8NC06 268 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 KRT35Q92764 455 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 IMMP1LQ96LU5 166 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 FRMD6Q96NE9 622 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 SIGLEC12Q96PQ1 595 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 CARD6Q9BX69 1037 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 HES7Q9BYE0 225 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 TGIF2Q9GZN2 237 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 ANKRD10Q9NXR5 420 aa16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 TTC7AQ9ULT0 858 aaPredicted RBP16.3■□□□□ 0.2
CSNK1E-215ENST00000612795 OR2A25A4D2G3 310 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 KRT87PA6NCN2 255 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 MROH6A6NGR9 719 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 E9PLN8 166 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 PRRG2O14669 202 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 PJA2O43164 708 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 ZNF189O75820 626 aaPredicted RBP16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 GOT2P00505 430 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 PPARGP37231 505 aaPredicted RBP16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 SLC26A3P40879 764 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 COPS2P61201 443 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 TUBA3CQ13748 450 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 OR1C1Q15619 314 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 SYT16Q17RD7 645 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 HKDC1Q2TB90 917 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 ACER2Q5QJU3 275 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 MFSD4BQ5TF39 518 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 TUBA3EQ6PEY2 450 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 TMEM200AQ86VY9 491 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 KRT222Q8N1A0 295 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 MDS2Q8NDY4 140 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 OR2A1Q8NGT9 310 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 HMGCLL1Q8TB92 370 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 TREX2Q9BQ50 279 aaPredicted RBP16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 VKORC1Q9BQB6 163 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 UTP23Q9BRU9 249 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 DPH7Q9BTV6 452 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 ACAT2Q9BWD1 397 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 DRC3Q9H069 523 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 KCNK13Q9HB14 408 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 ABHD10Q9NUJ1 306 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 C19orf25Q9UFG5 118 aaPredicted RBP16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
CSNK1E-215ENST00000612795 A0A0A6YYC8 382 aaPredicted RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 IGHV3-20A0A0C4DH32 117 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 ASPDHA6ND91 283 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 I3L1I5 382 aaPredicted RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 ZNHIT1O43257 154 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms