RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 FKBP9O95302 570 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 APOA4P06727 396 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 RWDD2BP57060 319 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 MUM1Q2TAK8 710 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 ZC3H7AQ8IWR0 971 aaKnown RBP22.24■■□□□ 1.15
MMP28-203ENST00000612672 OR6P1Q8NGX9 317 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 DNAJB8Q8NHS0 232 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 SLC35B2Q8TB61 432 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 ADAMTS18Q8TE60 1221 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 CABS1Q96KC9 395 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 ZFYVE21Q9BQ24 234 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 DPH7Q9BTV6 452 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 ACAT2Q9BWD1 397 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 RAB11FIP5Q9BXF6 653 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 ZNF700Q9H0M5 742 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 RIC8BQ9NVN3 520 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 TSR3Q9UJK0 312 aaKnown RBP22.24■■□□□ 1.15
MMP28-203ENST00000612672 TTC7AQ9ULT0 858 aaPredicted RBP22.24■■□□□ 1.15
MMP28-203ENST00000612672 DNHD1Q96M86 4753 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 OR5H15A6NDH6 313 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 FOXS1O43638 330 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 WFS1O76024 890 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 CRYABP02511 175 aaKnown RBP22.23■■□□□ 1.15
MMP28-203ENST00000612672 SLC26A3P40879 764 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 KLF1Q13351 362 aaPredicted RBP22.23■■□□□ 1.15
MMP28-203ENST00000612672 P3H1Q32P28 736 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 TMEM205Q6UW68 189 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 RIPOR1Q6ZS17 1223 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 SPNS2Q8IVW8 549 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 RAD51AP1Q96B01 352 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 IMMP1LQ96LU5 166 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 YIPF2Q9BWQ6 316 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 HES7Q9BYE0 225 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 P2RY12Q9H244 342 aa22.23■■□□□ 1.15
MMP28-203ENST00000612672 P2RX6O15547 441 aa22.22■■□□□ 1.15
MMP28-203ENST00000612672 HEXBP07686 556 aa22.22■■□□□ 1.15
MMP28-203ENST00000612672 MAT1AQ00266 395 aaKnown RBP22.22■■□□□ 1.15
MMP28-203ENST00000612672 CDH17Q12864 832 aa22.22■■□□□ 1.15
MMP28-203ENST00000612672 FASTKD1Q53R41 847 aaKnown RBP22.22■■□□□ 1.15
MMP28-203ENST00000612672 PRUNE1Q86TP1 453 aa22.22■■□□□ 1.15
MMP28-203ENST00000612672 LRRC57Q8N9N7 239 aa22.22■■□□□ 1.15
MMP28-203ENST00000612672 DNAAF3Q8N9W5 541 aa22.22■■□□□ 1.15
MMP28-203ENST00000612672 TSPAN10Q9H1Z9 355 aaPredicted RBP22.22■■□□□ 1.15
MMP28-203ENST00000612672 RIMKLBQ9ULI2 386 aa22.22■■□□□ 1.15
MMP28-203ENST00000612672 IGHV3-20A0A0C4DH32 117 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 GRID2IPA4D2P6 1211 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 UQCRHP07919 91 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 ERVK-10P10266 1014 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 CXCR2P25025 360 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 ZNF33BQ06732 778 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.21■■□□□ 1.15
MMP28-203ENST00000612672 FCRLBQ6BAA4 426 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 MTFR2Q6P444 385 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 XKRXQ6PP77 449 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 SUSD1Q6UWL2 747 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 LANCL3Q6ZV70 420 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 PAQR7Q86WK9 346 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 MMABQ96EY8 250 aaPredicted RBP22.21■■□□□ 1.15
MMP28-203ENST00000612672 NPAS2Q99743 824 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 TGIF2Q9GZN2 237 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 ETNK1Q9HBU6 452 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 C14orf105Q9NVL8 296 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 PACSIN2Q9UNF0 486 aaPredicted RBP22.21■■□□□ 1.15
MMP28-203ENST00000612672 ZNF835Q9Y2P0 537 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 REXO2Q9Y3B8 237 aaKnown RBP22.21■■□□□ 1.15
MMP28-203ENST00000612672 TCAF1Q9Y4C2 921 aa22.21■■□□□ 1.15
MMP28-203ENST00000612672 MAP1AP78559 2803 aaPredicted RBP22.2■■□□□ 1.14
MMP28-203ENST00000612672 SCN3AQ9NY46 2000 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 A0A0A6YYC8 382 aaPredicted RBP22.2■■□□□ 1.14
MMP28-203ENST00000612672 I3L1I5 382 aaPredicted RBP22.2■■□□□ 1.14
MMP28-203ENST00000612672 PRMT5O14744 637 aaPredicted RBP22.2■■□□□ 1.14
MMP28-203ENST00000612672 SUN1O94901 812 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 TMED2Q15363 201 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 ZNF766Q5HY98 468 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 CTSL3PQ5NE16 218 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 LINC00523Q86TU6 105 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 CSNK1A1LQ8N752 337 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 ATG4AQ8WYN0 398 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 SIGLEC12Q96PQ1 595 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 PLCD4Q9BRC7 762 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 TSSK1BQ9BXA7 367 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 LACRTQ9GZZ8 138 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 SPG11Q96JI7 2443 aa22.2■■□□□ 1.14
MMP28-203ENST00000612672 PSMD3O43242 534 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 MAN1A2O60476 641 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 SEC24DO94855 1032 aaPredicted RBP22.19■■□□□ 1.14
MMP28-203ENST00000612672 STATHP02808 62 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 ERGP11308 486 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 ADRA1DP25100 572 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.19■■□□□ 1.14
MMP28-203ENST00000612672 ABHD17BQ5VST6 288 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 LRRC8BQ6P9F7 803 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 BEST3Q8N1M1 668 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 SKA2Q8WVK7 121 aaPredicted RBP22.19■■□□□ 1.14
MMP28-203ENST00000612672 MTFMTQ96DP5 389 aaKnown RBP22.19■■□□□ 1.14
MMP28-203ENST00000612672 OR2A5Q96R48 311 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 TTC1Q99614 292 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 MKKSQ9NPJ1 570 aaPredicted RBP22.19■■□□□ 1.14
MMP28-203ENST00000612672 CATSPERZQ9NTU4 200 aa22.19■■□□□ 1.14
MMP28-203ENST00000612672 MKL2Q9ULH7 1088 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms