RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 PRDM8Q9NQV8 689 aa21.53■■□□□ 1.04
UBE3C-209ENST00000611269 TBC1D29Q9UFV1 150 aa21.53■■□□□ 1.04
UBE3C-209ENST00000611269 TRPS1Q9UHF7 1281 aa21.53■■□□□ 1.04
UBE3C-209ENST00000611269 CACNA1HO95180 2353 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 KATNA1O75449 491 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 BCAS2O75934 225 aaPredicted RBP21.52■■□□□ 1.04
UBE3C-209ENST00000611269 WDR47O94967 919 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 HIST1H2AGP0C0S8 130 aaPredicted RBP21.52■■□□□ 1.04
UBE3C-209ENST00000611269 SLC35G4P0C7Q5 338 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 HIST1H2ADP20671 130 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 ACADLP28330 430 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 HMOX2P30519 316 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 HOXD12P35452 270 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 ARL1P40616 181 aaPredicted RBP21.52■■□□□ 1.04
UBE3C-209ENST00000611269 HNMTP50135 292 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 EMX2Q04743 252 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 C1orf61Q13536 156 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 TAF11Q15544 211 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 ATP6AP1LQ52LC2 224 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 ZC3H14Q6PJT7 736 aaKnown RBP21.52■■□□□ 1.04
UBE3C-209ENST00000611269 SFRP1Q8N474 314 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 HIST1H2AHQ96KK5 128 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 HIST1H2AJQ99878 128 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 H2AFJQ9BTM1 129 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 GSDMCQ9BYG8 508 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 SLC32A1Q9H598 525 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 SPAG4Q9NPE6 437 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 NMRK1Q9NWW6 199 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 ADA2Q9NZK5 511 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 MAP10Q9P2G4 905 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 MCM8Q9UJA3 840 aa21.52■■□□□ 1.04
UBE3C-209ENST00000611269 PDZK1P1A8MUH7 402 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 NR5A2O00482 541 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 ACOT8O14734 319 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 CFIP05156 583 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 HTR6P50406 440 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 NME5P56597 212 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 MS4A2Q01362 244 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 DUOXA1Q1HG43 343 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 RETREG3Q86VR2 466 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 DNAJC9Q8WXX5 260 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 FOPNLQ96NB1 174 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 ZNF570Q96NI8 536 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 HOPXQ9BPY8 73 aaPredicted RBP21.52■■□□□ 1.03
UBE3C-209ENST00000611269 ZDHHC5Q9C0B5 715 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 FSCN3Q9NQT6 498 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 ZIM2Q9NZV7 527 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 TMEM181Q9P2C4 612 aa21.52■■□□□ 1.03
UBE3C-209ENST00000611269 CFAP20Q9Y6A4 193 aaKnown RBP21.52■■□□□ 1.03
UBE3C-209ENST00000611269 ARHGEF17Q96PE2 2063 aaPredicted RBP21.51■■□□□ 1.03
UBE3C-209ENST00000611269 SLC22A3O75751 556 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 BAG2O95816 211 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 EML2O95834 649 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 CAPN3P20807 821 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 AP1S2P56377 157 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 FLOT2Q14254 428 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 SMU1Q2TAY7 513 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 VPS26BQ4G0F5 336 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 MBOAT1Q6ZNC8 495 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 TAF8Q7Z7C8 310 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 GPATCH1Q9BRR8 931 aaKnown RBP21.51■■□□□ 1.03
UBE3C-209ENST00000611269 ERVMER34-1Q9H9K5 563 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 SUCOQ9UBS9 1254 aaKnown RBP21.51■■□□□ 1.03
UBE3C-209ENST00000611269 CD300AQ9UGN4 299 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 CCL27Q9Y4X3 112 aa21.51■■□□□ 1.03
UBE3C-209ENST00000611269 PATE3B3GLJ2 98 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 IFRD1O00458 451 aaPredicted RBP21.5■■□□□ 1.03
UBE3C-209ENST00000611269 LSM1O15116 133 aaKnown RBP21.5■■□□□ 1.03
UBE3C-209ENST00000611269 ANGPT2O15123 496 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 PSIP1O75475 530 aaKnown RBP21.5■■□□□ 1.03
UBE3C-209ENST00000611269 CYP2A7P20853 494 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 HNRNPKP61978 463 aaKnown RBP eCLIP21.5■■□□□ 1.03
UBE3C-209ENST00000611269 CLCA4Q14CN2 919 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 ABRAXAS2Q15018 415 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 UAP1L1Q3KQV9 507 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 CAPRIN2Q6IMN6 1127 aaKnown RBP21.5■■□□□ 1.03
UBE3C-209ENST00000611269 LRRC70Q7Z2Q7 622 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 MINDY1Q8N5J2 469 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 HIPK4Q8NE63 616 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 MCOLN3Q8TDD5 553 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 ASB9Q96DX5 294 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 TAAR2Q9P1P5 351 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 ADAMTS9Q9P2N4 1935 aa21.5■■□□□ 1.03
UBE3C-209ENST00000611269 A0A1W2PP18 115 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 ARHGEF33A8MVX0 844 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 H3BNX3 289 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 ZFP36L2P47974 494 aaKnown RBP21.49■■□□□ 1.03
UBE3C-209ENST00000611269 SLC6A12P48065 614 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 RCAN2Q14206 197 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 TRIM25Q14258 630 aaKnown RBP21.49■■□□□ 1.03
UBE3C-209ENST00000611269 MUM1Q2TAK8 710 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 PRMT9Q6P2P2 845 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 RNF111Q6ZNA4 994 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 TRIM46Q7Z4K8 759 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 RABEPKQ7Z6M1 372 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 DHDDSQ86SQ9 333 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 RNF148Q8N7C7 305 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 FNDC5Q8NAU1 212 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 CEP76Q8TAP6 659 aa21.49■■□□□ 1.03
UBE3C-209ENST00000611269 LMX1AQ8TE12 382 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms