RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GANABQ14697 944 aaKnown RBP19.81■□□□□ 0.76
SSBP3-216ENST00000610401 MAD2L1BPQ15013 274 aaPredicted RBP19.81■□□□□ 0.76
SSBP3-216ENST00000610401 FXNQ16595 210 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 ATAD3BQ5T9A4 648 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 PEX13Q92968 403 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 BOLA1Q9Y3E2 137 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 YY2O15391 372 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 STC2O76061 302 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 F11P03951 625 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 CCDC159P0C7I6 412 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 BPIP17213 487 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 HNF1BP35680 557 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 DESI1Q6ICB0 168 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 MYO19Q96H55 970 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 CNDP2Q96KP4 475 aaKnown RBP19.81■□□□□ 0.76
SSBP3-216ENST00000610401 FNIP2Q9P278 1114 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 TFECO14948 347 aaPredicted RBP19.81■□□□□ 0.76
SSBP3-216ENST00000610401 ITGALP20701 1170 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 COPZ1P61923 177 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 CAMK2GQ13555 558 aaPredicted RBP19.81■□□□□ 0.76
SSBP3-216ENST00000610401 DSC3Q14574 896 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 MED22Q15528 200 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 TIGD6Q17RP2 521 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 KLHL17Q6TDP4 642 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 SETD9Q8NE22 299 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 OR5AK3PQ8NH89 298 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 LINC01599Q8WXQ3 324 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 FUBP3Q96I24 572 aaKnown RBP eCLIP19.81■□□□□ 0.76
SSBP3-216ENST00000610401 CCDC115Q96NT0 180 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 COPS8Q99627 209 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 DDX28Q9NUL7 540 aaKnown RBP19.81■□□□□ 0.76
SSBP3-216ENST00000610401 SCN4AP35499 1836 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 GLYATL1P3A0A0U1RQE8 302 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 PABPN1LA6NDY0 278 aaKnown RBP19.8■□□□□ 0.76
SSBP3-216ENST00000610401 J3KTA2 159 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 LAMP1P11279 417 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 GABARAPL2P60520 117 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 NPRL3Q12980 569 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 MBTPS1Q14703 1052 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 FAM214AQ32MH5 1076 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 SPATS1Q496A3 300 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 SHQ1Q6PI26 577 aaKnown RBP19.8■□□□□ 0.76
SSBP3-216ENST00000610401 ARMC8Q8IUR7 673 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 OR4K1Q8NGD4 311 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 CENPOQ9BU64 300 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 RMND5AQ9H871 391 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 RMI1Q9H9A7 625 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 KIAA1522Q9P206 1035 aaPredicted RBP19.8■□□□□ 0.76
SSBP3-216ENST00000610401 FAM227AF5H4B4 570 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 TLL1O43897 1013 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 CLDN11O75508 207 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 WBP4O75554 376 aaKnown RBP19.8■□□□□ 0.76
SSBP3-216ENST00000610401 MFN2O95140 757 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 SLC10A3P09131 477 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 SLC19A1P41440 591 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 CRATP43155 626 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 TGM4P49221 684 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 STK19P49842 368 aaPredicted RBP19.8■□□□□ 0.76
SSBP3-216ENST00000610401 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.8■□□□□ 0.76
SSBP3-216ENST00000610401 ENTHD1Q8IYW4 607 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 RBFAQ8N0V3 343 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 S100ZQ8WXG8 99 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 FEVQ99581 238 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 ACSL6Q9UKU0 697 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 CLEC4EQ9ULY5 219 aa19.8■□□□□ 0.76
SSBP3-216ENST00000610401 TDRD15B5MCY1 1934 aaKnown RBP19.8■□□□□ 0.76
SSBP3-216ENST00000610401 OR2AG2A6NM03 316 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 ANXA5P08758 320 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 HOXC8P31273 242 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 KDELR2P33947 212 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 HKDC1Q2TB90 917 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 IER5LQ5T953 404 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 CXorf57Q6NSI4 855 aaKnown RBP19.79■□□□□ 0.76
SSBP3-216ENST00000610401 OR8H2Q8N162 312 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 AADATQ8N5Z0 425 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 YIPF6Q96EC8 236 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 B3GNT3Q9Y2A9 372 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 DYTNA2CJ06 578 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 KCNK2O95069 426 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 SMAD3P84022 425 aaKnown RBP19.79■□□□□ 0.76
SSBP3-216ENST00000610401 ABRQ12979 859 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 NEK5Q6P3R8 708 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.79■□□□□ 0.76
SSBP3-216ENST00000610401 CYP2U1Q7Z449 544 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 UROC1Q96N76 676 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 SNX6Q9UNH7 406 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 OARD1Q9Y530 152 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 EPN2O95208 641 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 ALDH2P05091 517 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 HMGCLP35914 325 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 CDH12P55289 794 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 KCNC4Q03721 635 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 CHIT1Q13231 466 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 MAD2L1Q13257 205 aaPredicted RBP19.79■□□□□ 0.76
SSBP3-216ENST00000610401 HECTD3Q5T447 861 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 RSBN1Q5VWQ0 802 aaPredicted RBP19.79■□□□□ 0.76
SSBP3-216ENST00000610401 KIAA1614Q5VZ46 1190 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 SLC24A5Q71RS6 500 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 AKAP14Q86UN6 197 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 GPR26Q8NDV2 337 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms