RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 MYDGFQ969H8 173 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 TMCO6Q96DC7 493 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 C11orf70Q9BRQ4 267 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 KATNB1Q9BVA0 655 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 BOCQ9BWV1 1114 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 CADM1Q9BY67 442 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 POTEKPQ9BYX7 375 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ROGDIQ9GZN7 287 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 SMYD3Q9H7B4 428 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM8AQ9HCN3 771 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 G6PC2Q9NQR9 355 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 LRIT1Q9P2V4 623 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 AMFRQ9UKV5 643 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 AGO1Q9UL18 857 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PPIEQ9UNP9 301 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 RAD54BQ9Y620 910 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 A0A0U1RQV5 110 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PRR23AA6NEV1 266 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 TCP11X1B4DZS4 312 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 E9PI62 339 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 WWP2O00308 870 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 POLRMTO00411 1230 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PIK3R2O00459 728 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PRRG1O14668 218 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ABCD4O14678 606 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 TM9SF1O15321 606 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 B4GALT2O60909 372 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 GPX5O75715 221 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 LDLRP01130 860 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 UGT2B4P06133 528 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 NUDT17P0C025 328 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ELNP15502 786 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ECHS1P30084 290 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ALCAMQ13740 583 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 NTRK2Q16620 822 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 LRRC36Q1X8D7 754 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 DCST1Q5T197 706 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ARMC12Q5T9G4 340 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PYROXD2Q8N2H3 581 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 FNDC5Q8NAU1 212 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 SRFBP1Q8NEF9 429 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC24A4Q8NFF2 622 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PSPC1Q8WXF1 523 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 CACNG8Q8WXS5 425 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ING5Q8WYH8 240 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 AKAP1Q92667 903 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PDXPQ96GD0 296 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 LRR1Q96L50 414 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 C12orf66Q96MD2 445 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 FCRL3Q96P31 734 aaPredicted RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 C12orf57Q99622 126 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 SMOQ99835 787 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ACBD6Q9BR61 282 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 WDR83Q9BRX9 315 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 BTBD10Q9BSF8 475 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 CCM2Q9BSQ5 444 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 MTG1Q9BT17 334 aaPredicted RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 IKZF4Q9H2S9 585 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PNO1Q9NRX1 252 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 WARS2Q9UGM6 360 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PLA2G4CQ9UP65 541 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 RHBDD3Q9Y3P4 386 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 USP6P35125 1406 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PRSS38A1L453 326 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ISM1B1AKI9 464 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 LINC00587B1AMM8 73 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 F8WDY8 70 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 FOXE1O00358 373 aaPredicted RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 HBP1O60381 514 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 CELF2O95319 508 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 POMCP01189 267 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 NTRK1P04629 796 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 KRT8P05787 483 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 CELA3BP08861 270 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 STAG3L2P0CL84 134 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 MAT2AP31153 395 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 DLSTP36957 453 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 CSNK1EP49674 416 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 HK3P52790 923 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 COPZ1P61923 177 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 MALLQ13021 153 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 TOP3AQ13472 1001 aaPredicted RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 TP53BP2Q13625 1128 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 FASTKD3Q14CZ7 662 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 TRMT5Q32P41 509 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 LBHQ53QV2 105 aaPredicted RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 NOL9Q5SY16 702 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 HES5Q5TA89 166 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM88Q6PEY1 159 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 SYCE2Q6PIF2 218 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 FRMD7Q6ZUT3 714 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 UTS2BQ765I0 119 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 LYSMD2Q8IV50 215 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 MICU2Q8IYU8 434 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 IL22RA1Q8N6P7 574 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PLD5Q8N7P1 536 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF781Q8N8C0 355 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 C11orf65Q8NCR3 313 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 OR7G3Q8NG95 312 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms