RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 KLK4Q9Y5K2 254 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 CSAG2Q9Y5P2 127 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 ANKUB1A6NFN9 424 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 VSTM2BA6NLU5 285 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 ARHGEF33A8MVX0 844 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 MED26O95402 600 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 CLCN7P51798 805 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 YBX1P67809 324 aaKnown RBP20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 LONRF1Q17RB8 773 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 KLHL38Q2WGJ6 581 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 TUBB8Q3ZCM7 444 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 RNASEH2BQ5TBB1 312 aaKnown RBP20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 AGAP7PQ5VUJ5 663 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 GIMAP7Q8NHV1 300 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 SIGLEC10Q96LC7 697 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 AGAP4Q96P64 663 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 SLC30A3Q99726 388 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 WDR77Q9BQA1 342 aaPredicted RBP20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 ACAT2Q9BWD1 397 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 DDX47Q9H0S4 455 aaKnown RBP20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 C20orf96Q9NUD7 363 aaPredicted RBP20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 STOX2Q9P2F5 926 aaPredicted RBP20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 ERRFI1Q9UJM3 462 aaPredicted RBP20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 PCDHGA10Q9Y5H3 936 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 PCM1Q15154 2024 aa20.24■□□□□ 0.83
PPFIA3-209ENST00000602783 PSIP1O75475 530 aaKnown RBP20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 CMPK1P30085 196 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 OCA2Q04671 838 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 ELOAQ14241 798 aaKnown RBP20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 FBXO42Q6P3S6 717 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 SPNS2Q8IVW8 549 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 PRSS58Q8IYP2 241 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 OR11G2Q8NGC1 345 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 OR9A1PQ8NGU1 263 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 DNAJB14Q8TBM8 379 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 VPS50Q96JG6 964 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 DPH7Q9BTV6 452 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 CRB3Q9BUF7 120 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 LHPPQ9H008 270 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 CCDC68Q9H2F9 335 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 ASIC3Q9UHC3 531 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 NTNG1Q9Y2I2 539 aa20.23■□□□□ 0.83
PPFIA3-209ENST00000602783 ERGP11308 486 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 MPP1Q00013 466 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 KLC1Q07866 573 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 CUL1Q13616 776 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 TTLL9Q3SXZ7 439 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 ZNF549Q6P9A3 640 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 SUSD1Q6UWL2 747 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 RNF44Q7L0R7 432 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 STT3BQ8TCJ2 826 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 PPP4R1Q8TF05 950 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 KCNJ9Q92806 393 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 MIEF2Q96C03 454 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 THOC3Q96J01 351 aaKnown RBP20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 BARD1Q99728 777 aaKnown RBP20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 ZFYVE21Q9BQ24 234 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 FAM114A2Q9NRY5 505 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 AGPAT4Q9NRZ5 378 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 ZNF282Q9UDV7 671 aaPredicted RBP20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 MED16Q9Y2X0 877 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 TEX15Q9BXT5 2789 aa20.22■□□□□ 0.83
PPFIA3-209ENST00000602783 OR2A25A4D2G3 310 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 USP27XA6NNY8 438 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 MYO1CO00159 1063 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 DNALI1O14645 258 aaPredicted RBP20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 CATP04040 527 aaKnown RBP20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 ZGLP1P0C6A0 271 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 ERVK-10P10266 1014 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 CARSP49589 748 aaKnown RBP20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 TSTA3Q13630 321 aaPredicted RBP20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 PTK6Q13882 451 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 NAA25Q14CX7 972 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 MUM1Q2TAK8 710 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 PRMT9Q6P2P2 845 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 IGFL2Q6UWQ7 119 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 NEK10Q6ZWH5 1172 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 LMNTD2Q8IXW0 634 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 CALML6Q8TD86 181 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 SMPDL3AQ92484 453 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 CNDP1Q96KN2 507 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 MESP1Q9BRJ9 268 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 FAM167BQ9BTA0 163 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 MRPS30Q9NP92 439 aaKnown RBP20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 NOVA2Q9UNW9 492 aaKnown RBP20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 SLC5A6Q9Y289 635 aa20.21■□□□□ 0.83
PPFIA3-209ENST00000602783 UNC79Q9P2D8 2635 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 WIPF3A6NGB9 483 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 H0YGG7 62 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 BANF1O75531 89 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 LDLRP01130 860 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 TCP1P17987 556 aaKnown RBP20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 PGAM1P18669 254 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 RPA3P35244 121 aaPredicted RBP20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 ARF3P61204 181 aaPredicted RBP20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 Q0VFX4 171 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 CRYMQ14894 314 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 HSP90AA5PQ58FG0 334 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 VWA2Q5GFL6 755 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms