RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ADAMTS6Q9UKP5 1117 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 FARSAQ9Y285 508 aaKnown RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 E9PI62 339 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 PRMT5O14744 637 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 HTRA2O43464 458 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 AP2A1O95782 977 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TEAD4Q15561 434 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 NDNFQ8TB73 568 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 RETREG1Q9H6L5 497 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 NPPAP01160 153 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 DSC2Q02487 901 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 EEF1DP3Q658K8 133 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ANKRD54Q6NXT1 300 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 SLC30A6Q6NXT4 461 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 LRRC70Q7Z2Q7 622 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 LRRC57Q8N9N7 239 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 OR5H6Q8NGV6 325 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TMEM209Q96SK2 561 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ASPNQ9BXN1 380 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ACTR10Q9NZ32 417 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 DISP2A7MBM2 1401 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 PIP5K1BO14986 540 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 CD53P19397 219 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 CCL23P55773 120 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 PARP15Q460N3 678 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 KLHL26Q53HC5 615 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 NDUFAF5Q5TEU4 345 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 C11orf65Q8NCR3 313 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 OR4C6Q8NH72 309 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 LHX5Q9H2C1 402 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 CDC14AQ9UNH5 594 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 INPPL1O15357 1258 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 CD72P21854 359 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TMBIM6P55061 237 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 GANABQ14697 944 aaKnown RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 PYROXD2Q8N2H3 581 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 B3GNT4Q9C0J1 378 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 IPPKQ9H8X2 491 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ADAMDEC1O15204 470 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 MPZL2O60487 215 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 NME6O75414 186 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 RASGRP1O95267 797 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ITGB5P18084 799 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 OPRL1P41146 370 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 DBPQ10586 325 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 GPR142Q7Z601 462 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 GJD3Q8N144 294 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 OR51V1Q9H2C8 321 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 SSU72Q9NP77 194 aaKnown RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 SPAM1P38567 509 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 NOMO1Q15155 1222 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 DESI1Q6ICB0 168 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 SNAPC3Q92966 411 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 RFKQ969G6 155 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 COPZ2Q9P299 210 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 KCNN3Q9UGI6 736 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 CA5BQ9Y2D0 317 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 MOGSQ13724 837 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 LARS2Q15031 903 aaKnown RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TEX44Q53QW1 395 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ARL9Q6T311 187 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 FAM217AQ8IXS0 508 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 METTL4Q8N3J2 472 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ADAMTS15Q8TE58 950 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ERVK-6Q9BXR3 956 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TGIF2Q9GZN2 237 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 MRPL15Q9P015 296 aaKnown RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ERVK-18Q9QC07 812 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 MRTO4Q9UKD2 239 aaKnown RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 SNX10Q9Y5X0 201 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 RGPD2P0DJD1 1756 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TSTD3H0UI37 97 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 C22orf31O95567 290 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 LUMP51884 338 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 HERVK_113P63132 956 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TLE2Q04725 743 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 FGFBP1Q14512 234 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 FKBP1CQ5VVH2 108 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TREML1Q86YW5 311 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 RELTQ969Z4 430 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 C5orf34Q96MH7 638 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 NUDT4Q9NZJ9 180 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF510Q9Y2H8 683 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 C2orf92A0A1B0GVN3 265 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 OR1I1O60431 355 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 BCAS2O75934 225 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 LAMP2P13473 410 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 JUNDP17535 347 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CORO1AP31146 461 aaKnown RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ADRA1BP35368 520 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 C21orf62-AS1Q17RA5 79 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PLPP4Q5VZY2 271 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CFAP77Q6ZQR2 320 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 QSOX2Q6ZRP7 698 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 SMURF2Q9HAU4 748 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CD84Q9UIB8 345 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 A6NHS1 94 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 AGAP5A6NIR3 686 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms