RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 LSMEM2Q8N112 164 aa19.69■□□□□ 0.74
PNKP-215ENST00000600910 DCBLD1Q8N8Z6 715 aa19.69■□□□□ 0.74
PNKP-215ENST00000600910 LRRC8CQ8TDW0 803 aa19.69■□□□□ 0.74
PNKP-215ENST00000600910 MAGEB18Q96M61 343 aa19.69■□□□□ 0.74
PNKP-215ENST00000600910 CDK15Q96Q40 435 aa19.69■□□□□ 0.74
PNKP-215ENST00000600910 GFM1Q96RP9 751 aaKnown RBP19.69■□□□□ 0.74
PNKP-215ENST00000600910 DPH7Q9BTV6 452 aa19.69■□□□□ 0.74
PNKP-215ENST00000600910 TRMOQ9BU70 441 aa19.69■□□□□ 0.74
PNKP-215ENST00000600910 TOR4AQ9NXH8 423 aa19.69■□□□□ 0.74
PNKP-215ENST00000600910 SNRNP200O75643 2136 aaKnown RBP19.68■□□□□ 0.74
PNKP-215ENST00000600910 A0A1B0GTL3 188 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 TMEM114B3SHH9 223 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 H7BY64 318 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 NTN3O00634 580 aaPredicted RBP19.68■□□□□ 0.74
PNKP-215ENST00000600910 TM4SF5O14894 197 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 POLR3GO15318 223 aaPredicted RBP19.68■□□□□ 0.74
PNKP-215ENST00000600910 LYPLA1O75608 230 aaPredicted RBP19.68■□□□□ 0.74
PNKP-215ENST00000600910 RFPL3O75679 317 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 FKBP9O95302 570 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 OTCP00480 354 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 PVRP15151 417 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 MAGP20916 626 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 SERPINB5P36952 375 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 MDH1P40925 334 aaKnown RBP19.68■□□□□ 0.74
PNKP-215ENST00000600910 GRIA3P42263 894 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 SLC1A6P48664 564 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 ABCE1P61221 599 aaKnown RBP19.68■□□□□ 0.74
PNKP-215ENST00000600910 IRF8Q02556 426 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 TRAF3Q13114 568 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 ILKQ13418 452 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 XKR6Q5GH73 641 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 ARL13AQ5H913 290 aaPredicted RBP19.68■□□□□ 0.74
PNKP-215ENST00000600910 NXPE4Q6UWF7 544 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 ATG14Q6ZNE5 492 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 PRAP1Q96NZ9 151 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 ZNF382Q96SR6 550 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 CD180Q99467 661 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 NTMT1Q9BV86 223 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 SHCBP1LQ9BZQ2 653 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 C20orf27Q9GZN8 174 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 KLHL25Q9H0H3 589 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 ZNF395Q9H8N7 513 aaPredicted RBP19.68■□□□□ 0.74
PNKP-215ENST00000600910 ACTR8Q9H981 624 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 C1GALT1Q9NS00 363 aa19.68■□□□□ 0.74
PNKP-215ENST00000600910 TLCD2A6NGC4 264 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 KLF11O14901 512 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 RASSF9O75901 435 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 CSRP1P21291 193 aaKnown RBP19.67■□□□□ 0.74
PNKP-215ENST00000600910 VARSP26640 1264 aaKnown RBP19.67■□□□□ 0.74
PNKP-215ENST00000600910 SH3BP2P78314 561 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 PCDH1Q08174 1060 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 SPIDRQ14159 915 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 SNAP47Q5SQN1 464 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 ATG9BQ674R7 924 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 TTC19Q6DKK2 380 aaPredicted RBP19.67■□□□□ 0.74
PNKP-215ENST00000600910 ZNF574Q6ZN55 896 aaPredicted RBP19.67■□□□□ 0.74
PNKP-215ENST00000600910 ADCK2Q7Z695 626 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 ABHD11Q8NFV4 315 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 OR4F6Q8NGB9 312 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 AGAP11Q8TF27 550 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 SEMA6CQ9H3T2 930 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 MID1IP1Q9NPA3 183 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 ZNF225Q9UK10 706 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 STK38LQ9Y2H1 464 aa19.67■□□□□ 0.74
PNKP-215ENST00000600910 PTPRZ1P23471 2315 aaPredicted RBP19.66■□□□□ 0.74
PNKP-215ENST00000600910 D6RAR5 112 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 SLC30A4O14863 429 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 WFS1O76024 890 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 HSPA4LO95757 839 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 EBLN1P0CF75 366 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 C1GALT1C1LP0DN25 315 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 ST6GAL1P15907 406 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 CCR8P51685 355 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 ERVPABLB-1P60509 514 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 DOC2AQ14183 400 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 CLPPQ16740 277 aaPredicted RBP19.66■□□□□ 0.74
PNKP-215ENST00000600910 CACHD1Q5VU97 1274 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 GPRIN3Q6ZVF9 776 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 MILR1Q7Z6M3 343 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 SYVN1Q86TM6 617 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 MYLK4Q86YV6 388 aaPredicted RBP19.66■□□□□ 0.74
PNKP-215ENST00000600910 OR4D9Q8NGE8 314 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 WDR48Q8TAF3 677 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 TRAPPC9Q96Q05 1148 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 DPYSL5Q9BPU6 564 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 EHD1Q9H4M9 534 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 PELI2Q9HAT8 420 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 EML4Q9HC35 981 aaKnown RBP19.66■□□□□ 0.74
PNKP-215ENST00000600910 TMEM184CQ9NVA4 438 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 CDV3Q9UKY7 258 aaKnown RBP19.66■□□□□ 0.74
PNKP-215ENST00000600910 PCDHGA1Q9Y5H4 931 aa19.66■□□□□ 0.74
PNKP-215ENST00000600910 IGHV5-51A0A0C4DH38 117 aa19.65■□□□□ 0.74
PNKP-215ENST00000600910 SLC9B1P1A6NJY1 282 aa19.65■□□□□ 0.74
PNKP-215ENST00000600910 GIPC1O14908 333 aa19.65■□□□□ 0.74
PNKP-215ENST00000600910 NRP2O60462 931 aa19.65■□□□□ 0.74
PNKP-215ENST00000600910 SNNO75324 88 aaPredicted RBP19.65■□□□□ 0.74
PNKP-215ENST00000600910 OR4F21O95013 312 aa19.65■□□□□ 0.74
PNKP-215ENST00000600910 CLDN9O95484 217 aa19.65■□□□□ 0.74
PNKP-215ENST00000600910 CD22P20273 847 aa19.65■□□□□ 0.74
PNKP-215ENST00000600910 HRH2P25021 359 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms