RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TIPARPQ7Z3E1 657 aaKnown RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 THOC6Q86W42 341 aaKnown RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 DTX1Q86Y01 620 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 OR4K1Q8NGD4 311 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 CABS1Q96KC9 395 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 FCRL4Q96PJ5 515 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 CCDC86Q9H6F5 360 aaKnown RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 MRPS30Q9NP92 439 aaKnown RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 TMEM216Q9P0N5 145 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 SLC22A14Q9Y267 594 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 FER1L5A0AVI2 2057 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 DSPP15924 2871 aaKnown RBP13.18□□□□□ -0.3
VRK3-219ENST00000600137 TLDC2A0PJX2 215 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 SMIM23A6NLE4 172 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 H7BY64 318 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 GOLGA8RI6L899 631 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 DLGAP3O95886 979 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 CCND1P24385 295 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 ARL4DP49703 201 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 AGTR2P50052 363 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 CSNK1G2P78368 415 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 TSTA3Q13630 321 aaPredicted RBP13.18□□□□□ -0.3
VRK3-219ENST00000600137 DEFB110Q30KQ9 67 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 TNFAIP8L3Q5GJ75 292 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 TMTC4Q5T4D3 741 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 DCAF12Q5T6F0 453 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 FRMPD2BQ6IN97 320 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 C16orf46Q6P387 395 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 CEACAM20Q6UY09 585 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 FRA10AC1Q70Z53 315 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 RNF44Q7L0R7 432 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 BPHLQ86WA6 291 aaPredicted RBP13.18□□□□□ -0.3
VRK3-219ENST00000600137 ZFAND4Q86XD8 727 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 MCATQ8IVS2 390 aaKnown RBP13.18□□□□□ -0.3
VRK3-219ENST00000600137 CNPY4Q8N129 248 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 SLC38A9Q8NBW4 561 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 ABHD11Q8NFV4 315 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 SNIP1Q8TAD8 396 aaKnown RBP13.18□□□□□ -0.3
VRK3-219ENST00000600137 FGF11Q92914 225 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 RNF31Q96EP0 1072 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 MED8Q96G25 268 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 PRAP1Q96NZ9 151 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 ZIM3Q96PE6 472 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 TEFMQ96QE5 360 aaKnown RBP13.18□□□□□ -0.3
VRK3-219ENST00000600137 OR2A5Q96R48 311 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 EGFL8Q99944 293 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 ASPSCR1Q9BZE9 553 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 SPRTNQ9H040 489 aaPredicted RBP13.18□□□□□ -0.3
VRK3-219ENST00000600137 PCBD2Q9H0N5 130 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 THSD1Q9NS62 852 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 ABCF3Q9NUQ8 709 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 PCMTD2Q9NV79 361 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 TMEM184CQ9NVA4 438 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 SOHLH2Q9NX45 425 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 NUDT4Q9NZJ9 180 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 ANKMY1Q9P2S6 941 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 RARRES3Q9UL19 164 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 EMCNQ9ULC0 261 aa13.18□□□□□ -0.3
VRK3-219ENST00000600137 TMEM184BQ9Y519 407 aaPredicted RBP13.18□□□□□ -0.3
VRK3-219ENST00000600137 LOC105369274A0A096LPK9 316 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 LOC102723532A0A0G2JNH3 316 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 LRRC14BA6NHZ5 514 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 TMEM150CB9EJG8 249 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
VRK3-219ENST00000600137 MT-ND3P03897 115 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 RBP1P09455 135 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 HSPA7P48741 367 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 E2F2Q14209 437 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 TSNAXIP1Q2TAA8 658 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 CATSPEREQ5SY80 951 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 TRABD2AQ86V40 505 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 PPP1R3BQ86XI6 285 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 PROSER1Q86XN7 944 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 OR4N4Q8N0Y3 316 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 TCAIMQ8N3R3 496 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 RIBC1Q8N443 379 aaPredicted RBP13.17□□□□□ -0.3
VRK3-219ENST00000600137 UBTD2Q8WUN7 234 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 NEIL2Q969S2 332 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 ALKBH8Q96BT7 664 aaKnown RBP13.17□□□□□ -0.3
VRK3-219ENST00000600137 CNTNAP3BQ96NU0 1288 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 MRPL57Q9BQC6 102 aaKnown RBP13.17□□□□□ -0.3
VRK3-219ENST00000600137 ZPBPQ9BS86 351 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 HAUS8Q9BT25 410 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 SARGQ9BW04 601 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 CNTNAP3Q9BZ76 1288 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 CD244Q9BZW8 370 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 SPNS1Q9H2V7 528 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 AKIRIN1Q9H9L7 192 aaPredicted RBP13.17□□□□□ -0.3
VRK3-219ENST00000600137 CD274Q9NZQ7 290 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 XPR1Q9UBH6 696 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 SNX7Q9UNH6 387 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 PLCL2Q9UPR0 1127 aa13.17□□□□□ -0.3
VRK3-219ENST00000600137 TEX51A0A1B0GUA7 166 aa13.16□□□□□ -0.3
VRK3-219ENST00000600137 TK2O00142 265 aa13.16□□□□□ -0.3
VRK3-219ENST00000600137 HAT1O14929 419 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms