RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 CFAP20Q9Y6A4 193 aaKnown RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 A0A1B0GTW7 788 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 MGAT4DA6NG13 374 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 PLOD2O00469 737 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 EFNA1P20827 205 aaPredicted RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 FASP25445 335 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 TIE1P35590 1138 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 CCT8P50990 548 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 GALK1P51570 392 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 RAE1P78406 368 aaKnown RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 CDK3Q00526 305 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 MYBPC1Q00872 1141 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 TAP2Q03519 686 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 CSTF3Q12996 717 aaKnown RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 FGL2Q14314 439 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 GCNT7Q6ZNI0 430 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 PROSER1Q86XN7 944 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 PAPD5Q8NDF8 572 aaKnown RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 OR5AR1Q8NGP9 310 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 OR9A1PQ8NGU1 263 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 CDC26Q8NHZ8 85 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 FIG4Q92562 907 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 TESCQ96BS2 214 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 OR52A5Q9H2C5 316 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 OAZ3Q9UMX2 235 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 GPR34Q9UPC5 381 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 TMED5Q9Y3A6 229 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 OR1A2Q9Y585 309 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 KCNE2Q9Y6J6 123 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 C17orf113A0A1B0GUU1 675 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 PRR23AA6NEV1 266 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 K7EQS6 105 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 ACOX3O15254 700 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 VEGFDO43915 354 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 APODP05090 189 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 HNF4AP41235 474 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 PCDH1Q08174 1060 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 ENPP2Q13822 863 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 NKG7Q16617 165 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 ITPRIPL2Q3MIP1 535 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 AASDHQ4L235 1098 aaPredicted RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 LRIF1Q5T3J3 769 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 PPP4R4Q6NUP7 873 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 SYT12Q8IV01 421 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 HDDC3Q8N4P3 179 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 C1orf52Q8N6N3 182 aaKnown RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 FBXO15Q8NCQ5 510 aaPredicted RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 GPR156Q8NFN8 814 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 HM13Q8TCT9 377 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 RAB7BQ96AH8 199 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 RNF145Q96MT1 663 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 CPPED1Q9BRF8 314 aaPredicted RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 CHID1Q9BWS9 393 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 RSPH9Q9H1X1 276 aaPredicted RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 KCNH6Q9H252 994 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 KAT8Q9H7Z6 458 aaKnown RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 MAGEL2Q9UJ55 1249 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 MSRAQ9UJ68 235 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 UTS2RQ9UKP6 389 aa13.98□□□□□ -0.17
VRK3-217ENST00000599538 ZFR2Q9UPR6 939 aaKnown RBP13.98□□□□□ -0.17
VRK3-217ENST00000599538 SCN2BO60939 215 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 PAK4O96013 591 aaPredicted RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 FUCA1P04066 466 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 NELFEP18615 380 aaKnown RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 EIF2DP41214 584 aaKnown RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 KIR2DL1P43626 348 aaPredicted RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 WNT3P56703 355 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 RPS13P62277 151 aaKnown RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 E2F2Q14209 437 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 ATAT1Q5SQI0 421 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 FAM46CQ5VWP2 391 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 CAPN13Q6MZZ7 669 aaPredicted RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 IYDQ6PHW0 289 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 ENPP6Q6UWR7 440 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 ADAMTSL4Q6UY14 1074 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 GPR180Q86V85 440 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 CHERPQ8IWX8 916 aaKnown RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 ZNF740Q8NDX6 193 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 ELSPBP1Q96BH3 223 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 CENPNQ96H22 339 aaPredicted RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 SGPP1Q9BX95 441 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 REXO4Q9GZR2 422 aaKnown RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 MKRN2Q9H000 416 aaKnown RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 S1PR5Q9H228 398 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 INVSQ9Y283 1065 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 ASF1AQ9Y294 204 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 MAN2B2Q9Y2E5 1009 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 GBAP04062 536 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 ANXA6P08133 673 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 MAPK1P28482 360 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 GZMMP51124 257 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 ACSM2AQ08AH3 577 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 CAMK2GQ13555 558 aaPredicted RBP13.97□□□□□ -0.17
VRK3-217ENST00000599538 NHSL2Q5HYW2 709 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 ACSM2BQ68CK6 577 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 EP400NLQ6ZTU2 488 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 CLECL1Q8IZS7 167 aa13.97□□□□□ -0.17
VRK3-217ENST00000599538 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms