RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CUTCQ9NTM9 273 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 C20orf96Q9NUD7 363 aaPredicted RBP12.63□□□□□ -0.39
H3F3B-213ENST00000593254 TRMT1Q9NXH9 659 aaKnown RBP12.63□□□□□ -0.39
H3F3B-213ENST00000593254 FAM169AQ9Y6X4 670 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 SVILO95425 2214 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 OR2A25A4D2G3 310 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 DSCR3O14972 297 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 NRP2O60462 931 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 SRPX2O60687 465 aaPredicted RBP12.62□□□□□ -0.39
H3F3B-213ENST00000593254 CATP04040 527 aaKnown RBP12.62□□□□□ -0.39
H3F3B-213ENST00000593254 UMODP07911 640 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 ALAS2P22557 587 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 FOXL2P58012 376 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 ARHGAP19Q14CB8 494 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 NAA25Q14CX7 972 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 PPP1R7Q15435 360 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 COX15Q7KZN9 410 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 RNF44Q7L0R7 432 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
H3F3B-213ENST00000593254 FBXO15Q8NCQ5 510 aaPredicted RBP12.62□□□□□ -0.39
H3F3B-213ENST00000593254 SMPDL3AQ92484 453 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 SLCO2A1Q92959 643 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 PTERQ96BW5 349 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 DDX47Q9H0S4 455 aaKnown RBP12.62□□□□□ -0.39
H3F3B-213ENST00000593254 SLC26A1Q9H2B4 701 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 CCDC68Q9H2F9 335 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 FAM114A2Q9NRY5 505 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 FBXO5Q9UKT4 447 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 DHRS7Q9Y394 339 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 MED13LQ71F56 2210 aa12.62□□□□□ -0.39
H3F3B-213ENST00000593254 A0A0J9YVX5 310 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 DNALI1O14645 258 aaPredicted RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 SLC16A8O95907 504 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 ALBP02768 609 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 MPC1LP0DKB6 136 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 ENO3P13929 434 aaPredicted RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 TCP1P17987 556 aaKnown RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 PGAM1P18669 254 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 CMPK1P30085 196 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 HSD17B2P37059 387 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 VSX2P58304 361 aaPredicted RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 YBX1P67809 324 aaKnown RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 CUL1Q13616 776 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 PTK6Q13882 451 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 CRYMQ14894 314 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 FAM214AQ32MH5 1076 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 HSP90AA5PQ58FG0 334 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 DCAF10Q5QP82 559 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 WASHC2DQ5SRD0 308 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 FRMPD2BQ6IN97 320 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 SUSD1Q6UWL2 747 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 OVCH1Q7RTY7 1134 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 PPP1R32Q7Z5V6 425 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 TMEM151BQ8IW70 566 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 TTC29Q8NA56 475 aaPredicted RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 CD200R1Q8TD46 325 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 ASB11Q8WXH4 323 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 NACC2Q96BF6 587 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 MOCOSQ96EN8 888 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 FER1L6-AS2Q96M78 137 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 PKP4Q99569 1192 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 SPSB2Q99619 263 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 GPR21Q99679 349 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 SMAD5Q99717 465 aaKnown RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 BARD1Q99728 777 aaKnown RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 ZFYVE21Q9BQ24 234 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 FAM167BQ9BTA0 163 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 DPH7Q9BTV6 452 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 ACAT2Q9BWD1 397 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 WDR54Q9H977 334 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 SLC6A20Q9NP91 592 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 P4HTMQ9NXG6 502 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 GPR83Q9NYM4 423 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 MAP10Q9P2G4 905 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 ASIC3Q9UHC3 531 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 G3BP2Q9UN86 482 aaKnown RBP12.61□□□□□ -0.39
H3F3B-213ENST00000593254 PKDREJQ9NTG1 2253 aa12.61□□□□□ -0.39
H3F3B-213ENST00000593254 LOC105369274A0A096LPK9 316 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 IGKV1-8A0A0C4DH67 115 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 LOC102723532A0A0G2JNH3 316 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 ANKUB1A6NFN9 424 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 A6NL46 340 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 USP27XA6NNY8 438 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 ZNF839A8K0R7 811 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 E7ENX8 843 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 GFYI3L273 518 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 EIF3FO00303 357 aaPredicted RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 PEX12O00623 359 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 HNRNPRO43390 633 aaKnown RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 HAUS5O94927 633 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 MED26O95402 600 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 IGHEP01854 428 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 PIM1P11309 404 aaPredicted RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 IVDP26440 423 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 PNLIPRP1P54315 467 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 MPP1Q00013 466 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms