RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 IFT20Q8IY31 132 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 DSELQ8IZU8 1212 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 NKAPQ8N5F7 415 aaKnown RBP11.04□□□□□ -0.64
VMP1-211ENST00000591315 METTL27Q8N6F8 245 aaPredicted RBP11.04□□□□□ -0.64
VMP1-211ENST00000591315 OR8K5Q8NH50 307 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.04□□□□□ -0.64
VMP1-211ENST00000591315 ZUFSPQ96AP4 578 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 PRAP1Q96NZ9 151 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 OR4K3Q96R72 315 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 SELENOSQ9BQE4 189 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 PLCD4Q9BRC7 762 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 SGPP1Q9BX95 441 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 ACSS3Q9H6R3 686 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 SYTL2Q9HCH5 934 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 INTS7Q9NVH2 962 aaKnown RBP11.04□□□□□ -0.64
VMP1-211ENST00000591315 IRAK4Q9NWZ3 460 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 PCDHB3Q9Y5E6 796 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 KLK4Q9Y5K2 254 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 TARM1B6A8C7 271 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 H0YGG7 62 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 ZSCAN9O15535 394 aaPredicted RBP11.03□□□□□ -0.64
VMP1-211ENST00000591315 P2RX6O15547 441 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 ZNF500O60304 480 aaPredicted RBP11.03□□□□□ -0.64
VMP1-211ENST00000591315 CNOT3O75175 753 aaKnown RBP11.03□□□□□ -0.64
VMP1-211ENST00000591315 EIF2S1P05198 315 aaKnown RBP11.03□□□□□ -0.64
VMP1-211ENST00000591315 CCNYL3P0C7X3 344 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 SLC35E2BP0CK96 405 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 CD1DP15813 335 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 NPPBP16860 134 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 STMN1P16949 149 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 HSD17B2P37059 387 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 RAB10P61026 200 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 ARF3P61204 181 aaPredicted RBP11.03□□□□□ -0.64
VMP1-211ENST00000591315 IRF9Q00978 393 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 CSHL1Q14406 222 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 WASHC2DQ5SRD0 308 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 PRAMEF13Q5VWM6 474 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 C16orf46Q6P387 395 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 FAM198BQ6UWH4 519 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 RNF44Q7L0R7 432 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 ADCK2Q7Z695 626 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 GPR135Q8IZ08 494 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 SHISA5Q8N114 240 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 OR56A3Q8NH54 315 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 SNRNP27Q8WVK2 155 aaKnown RBP11.03□□□□□ -0.64
VMP1-211ENST00000591315 STARD8Q92502 1023 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 ESAMQ96AP7 390 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 FBXL8Q96CD0 374 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 SLC45A3Q96JT2 553 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 ZNF285Q96NJ3 590 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 CYTH2Q99418 400 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 MACROD1Q9BQ69 325 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 FUT8Q9BYC5 575 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 TXLNGYQ9BZA5 131 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 FAM129AQ9BZQ8 928 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 DERL2Q9GZP9 239 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 SPNS1Q9H2V7 528 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 EPB41L4BQ9H329 900 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 POPDC3Q9HBV1 291 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 CCDC177Q9NQR7 707 aaPredicted RBP11.03□□□□□ -0.64
VMP1-211ENST00000591315 SLC22A11Q9NSA0 550 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 IGSF5Q9NSI5 407 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 CTNNAL1Q9UBT7 734 aa11.03□□□□□ -0.64
VMP1-211ENST00000591315 PCSK5Q92824 1860 aa11.02□□□□□ -0.64
VMP1-211ENST00000591315 NCF1BA6NI72 391 aaPredicted RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 NCF1CA8MVU1 366 aaPredicted RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 POC1B-GALNT4F8VUJ3 575 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 FKBP9O95302 570 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 HIST1H2AGP0C0S8 130 aaPredicted RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 CDH1P12830 882 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 NCF1P14598 390 aaPredicted RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 HIST1H2ADP20671 130 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 GDF5P43026 501 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 CSRP3P50461 194 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 CSNK1G2P78368 415 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 MEF2AQ02078 507 aaPredicted RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 NAB1Q13506 487 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 ERV3-1Q14264 604 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 HKDC1Q2TB90 917 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 SOWAHCQ53LP3 525 aaPredicted RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 CYB5D1Q6P9G0 228 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 ZNF517Q6ZMY9 492 aaPredicted RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 TTLL10Q6ZVT0 673 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 KCTD4Q8WVF5 259 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 SLC44A1Q8WWI5 657 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 TTC9Q92623 222 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 EXTL1Q92935 676 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 EXT2Q93063 718 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 KIAA1143Q96AT1 154 aaPredicted RBP11.02□□□□□ -0.65
VMP1-211ENST00000591315 NXNL1Q96CM4 212 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 TSPAN17Q96FV3 270 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 HIST1H2AHQ96KK5 128 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 UBXN10Q96LJ8 280 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 TSNARE1Q96NA8 513 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 LRFN5Q96NI6 719 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 GBP5Q96PP8 586 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 OR2A5Q96R48 311 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 HIST1H2AJQ99878 128 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 H2AFJQ9BTM1 129 aa11.02□□□□□ -0.65
VMP1-211ENST00000591315 SLC7A5P2Q9GIP4 190 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms